Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02431 ATGGCTTCTTCTCTCTTTTCATCCACTGCTTCTCTATCTTCTCACTACCATCTCAGCTTCACTGTCTTAGCCTTTCTCCTATCAGCCATCATTTTCTTCCTCACTCAAAAAACCAAATCCAAAAGCCTCAACCTTCCACCAGGTCCACCAGGATGGCCTATCGTCGGCAACCTTTTCCAAGTTGCGCGTTCCGGGAAACCGTTCTTTGAGTATGTGAAAGAAATGAAAGCGAAATATGGTGCAATATTCACACTCAAGATGGGAACAAGGACTATGATCATCCTCACGGACGCGAAACTTGTGCATGAAGCTTTGATTCAGAAGGGTGCTTTGTATGCAACTAGACCACCTGAGAATCCTACAAGGAACATCTTCAGTGCCAACAAGTTCACTGTGAATGCAGCAGTTTATGGTCCTGTTTGGAAATCACTGAGGAGAAACCTGGTTCAGAATATGCTGAGCTCAACTAGACTCAAAGAGTTTAGAACGGTTAGAGAGAAATCAATGGATAAACTCATCAATAGGCTTAGTGTTGAAGCTGAGAAGAATGATGGTGTTGTTTGGGTTCTCAAAGATGCAAGGTTTGCTGTTTTTTGCATACTTGTTGCTATGTGTTTTGGTTTAGAAATGGATGAAGAAAAACTCGAGAAAATAGATCAAGTTATGAAGAATGTTCTCATCACTTTAGATCCAAGAATTGATGACTTTTTACCAATTCTAAGCATGTTTTTCTCTAAGCAGAGAAAAAGAGTTTTGGAAGTTCGAAAAGAACAAGTCGAATTCATAGTTCCTTTCATTGAACAACGAAGAAGAGCAATTCAAAACCCTGGTTCAGATGAAACAGCTACAACATTTTCATATTTAGACACACTTTTTGGTGTCAAAGTTCATGAAGGTAAGAAATCATCACCTTCAAATGAAGAATTGGTTTCGCTTATCTCCGAGTTTCTCAATGGAGGAACCGATACAACAGCAACTGCTGTTGAGTGGGGAATAGCACAACTCCTTGACAATCCTGAGATTCAAGAAAAACTTTATCAAGAAATTAATATGACAGTTGGAGACAAAAAAGTAGATGAAAAAGATGTTGAGAAAATGCCTTATTTACAAGCTGTGGTGAAAGAGTTGTTAAGGAAGCATCCTCCAACACATTTTGTACTAACACATGGTGTTACTGAGCCTACAACTTTAGGAGGGTATGATATACCAATTGATGCAAATATTGAGATTTACACAGCTGGGATAGGTGAGGATCCTAAATTATGGCCTAACCCTGAAAAATTTGATCCTGAAAGGTTCATATCTAAGGGTGAGGAAGCTGATATAACAGGTGTTACTGGTGTGAAAATGATGCCGTTTGGTGTTGGGAGAAGGATATGTCCTGGTTTGGCTATTGGCACTGTGCATATTCATATGATGATGGCTAGGATGGTTCAGGAGTTTGAATGGAGTGCTTATCCACCAGGGAAGAAGATAGATTTCACCGGAAAGATGGAGTTTGCTGTTGTTATGAAGAATCCGTTAAGAGCAAAAATCAAGGCGAGAGGTTAA 1551 0.3965 MASSLFSSTASLSSHYHLSFTVLAFLLSAIIFFLTQKTKSKSLNLPPGPPGWPIVGNLFQVARSGKPFFEYVKEMKAKYGAIFTLKMGTRTMIILTDAKLVHEALIQKGALYATRPPENPTRNIFSANKFTVNAAVYGPVWKSLRRNLVQNMLSSTRLKEFRTVREKSMDKLINRLSVEAEKNDGVVWVLKDARFAVFCILVAMCFGLEMDEEKLEKIDQVMKNVLITLDPRIDDFLPILSMFFSKQRKRVLEVRKEQVEFIVPFIEQRRRAIQNPGSDETATTFSYLDTLFGVKVHEGKKSSPSNEELVSLISEFLNGGTDTTATAVEWGIAQLLDNPEIQEKLYQEINMTVGDKKVDEKDVEKMPYLQAVVKELLRKHPPTHFVLTHGVTEPTTLGGYDIPIDANIEIYTAGIGEDPKLWPNPEKFDPERFISKGEEADITGVTGVKMMPFGVGRRICPGLAIGTVHIHMMMARMVQEFEWSAYPPGKKIDFTGKMEFAVVMKNPLRAKIKARG 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02431 516 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 Pfam Cytochrome P450 46 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 CDD CYP77_89 78 509 - -
Vifa3g02431 516 Gene3D Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 FunFam Cytochrome P450 family protein 39 516 - -
Vifa3g02431 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vifa3g02431 516 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g02431 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 23 507 - -
Vifa3g02431 516 SUPERFAMILY Cytochrome P450 46 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02431 Vifa-Chr3 615600606 615602156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02431 12 515 Cytochrome P450 AT5G04630 62.648 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02431 K21995 - gmx:100795510 847.04