Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02331 ATGTATCACTTTTTGTATTGTTCTCATCTCTCTCATTCTCTTCCATTGATTTCAGCATTAGAGATTCACTTGAATCTTATGGTTGAGCTCTTTGTGATGATTGATTTTGAGTTTGAATATATTGAATTGATGTTAGGCATATGCTGCTGCCGTACAGTGAATCAAAACTATGCAAATATTCTTTTGATGCTTTTACGTCTCCGTCAGGCTTGTGATCACCCACTTCTTGTTAAAGAATACAATTCTGATCCTGTTGGAAAAGATTCTGTTGAAATGGCAAAAAGGCTTCCAAAAGAGATGTTGATAAATCTGTTTAATAGTTTGGAAACAACTGCCGCTATATGTTTTGTCTGCAATAGGCCAGAGAATAAGCTTGGAGATGATGAAACGTGGGATAGGGATGAAAGTGCTCTCAAGGAGGCTTTGGATGAGTTTGGCAAGCCATGGCAGTTGAATGAAGGGGATGGTGCATTCTATGGACCACAGATAGATATCAGTCTTGACTTCCAGCTTCCTGATCGTTTTAAGTTGGAACTCTCAGCTGAGGATGAAGCCAAAATTGAGAGGCCTGTTATGATACACAGAGCCATTCTAGGATCAGTTGAACGCATGTTTGCCATACTTTTAGAGCACTACAAGGGTAAATGGCCCTTCTGGCTCAGTCCTCGTAAAGCAATTTTGTGCCCTGTTTCTGAGAAATCACAAGCTTATGCTCTGAAGGTTCGAGATCAGATTCACCAAGAAGGATATCATGTAGATGCTGATACAACTGATAGGAAGATTCAGAAGAAGAATTTTAGTGGAAGACAGGGATTGGAATCACCCGCTGATGGTAGACGTTCATCTGAGTCTAGCTACCGTATTGGAGATAATGGAACTTCAGGGGGGACAAATTAG 897 0.4047 MYHFLYCSHLSHSLPLISALEIHLNLMVELFVMIDFEFEYIELMLGICCCRTVNQNYANILLMLLRLRQACDHPLLVKEYNSDPVGKDSVEMAKRLPKEMLINLFNSLETTAAICFVCNRPENKLGDDETWDRDESALKEALDEFGKPWQLNEGDGAFYGPQIDISLDFQLPDRFKLELSAEDEAKIERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRKAILCPVSEKSQAYALKVRDQIHQEGYHVDADTTDRKIQKKNFSGRQGLESPADGRRSSESSYRIGDNGTSGGTN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02331 298 MobiDBLite consensus disorder prediction 253 298 - -
Vifa3g02331 298 SUPERFAMILY Class II aaRS and biotin synthetases 99 209 IPR045864 -
Vifa3g02331 298 Gene3D Bira Bifunctional Protein; Domain 2 86 215 IPR045864 -
Vifa3g02331 298 Gene3D - 216 268 IPR036621 -
Vifa3g02331 298 PRINTS Threonyl-tRNA synthetase signature 190 203 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Vifa3g02331 298 PRINTS Threonyl-tRNA synthetase signature 217 229 IPR002320 GO:0004829|GO:0005524|GO:0005737|GO:0006435
Vifa3g02331 298 MobiDBLite consensus disorder prediction 277 298 - -
Vifa3g02331 298 PANTHER THREONINE-TRNA LIGASE 119 264 - -
Vifa3g02331 298 SUPERFAMILY Class II aaRS ABD-related 210 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02331 Vifa-Chr3 597694387 597698239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02331 52 121 RAD5 or RAD16-like Gene Family AT1G50410 68.571 4.98e-23 97.4