Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02328 ATGCATAATCATCGTTACCCCATGGCTTTCCCTATCCTTTTCCTTCTCTTCATTTGCCTTCCATTTTCCTCCGCCAAACTCAACACTGACTACTACAAAAAAACATGTCCCGACTTTGAAAAAATCGTCAGAGAACACATTTACATCAAACAAAGCTCTAGCCCAGCAACTGCACCCGGCATCCTCCGTATGTTTTTCCACGACTGTATCACCGACGGTTGCGACGCTTCCATCCTCGTCTCTTCCACCGCCTACAACCCTCACGCCGAACGTGACGCCGAACTCAACCTCTCCCTCTCTGGAGATGCATTTGACATCATTGTGAAAATTAAAAACGCTCTGGAGCTAGCTTGTCCCGGTATCGTTTCGTGTTCCGACGTTGTTGCACAGGCCACAAGAGACCTTGTTAAGATGGTTGGCGGTCCGTTTTATCCTGTTAGGTTAGGAAGAAAAGATAGTCTTGTATCAGATGCTTCAAGAACTGATGAAAGCCTTCCAACAACAACAATGACAATGGATGATATCATCAAGAAGTTTACCATAAAGAATTTCACTATAAGAGAAATGGTTGCTTTAACCGGTGCACACACAATAGGTTTCACTCACTGCAAAGAATTCAGCAACAGAATCTTCAACTACAGCAAAACTTCCGAGATTGATCCTACTCTTCACCCTAAACTTGCTGCAGGATTGAGAAGAGTGTGTCAGAATTACACCAGTGACCCTTCCATGGCTGCTTTCAATGATGTCAGGTCACCAGGGAAATTCGACAATGCTTTTTTTCAAAATGTGTTGAAGGGGTTGGGATTATTGACTAGTGATTATCTCTTGGCTGTTGATCCAAGAACAAAGCCAATCGTAGAACTCTATGCAAAAGATGAACGCGCTTTCTTTCAAGATTTTGCTAAGGCAATGGAGAAGCTTTCTGTGCATGGAGTCAAGACTGGTAAAAAAGGTGAAGTCAGGAGCAGGTGTGATCAGTTTAACCATATTCCTAATTAG 1002 0.4331 MHNHRYPMAFPILFLLFICLPFSSAKLNTDYYKKTCPDFEKIVREHIYIKQSSSPATAPGILRMFFHDCITDGCDASILVSSTAYNPHAERDAELNLSLSGDAFDIIVKIKNALELACPGIVSCSDVVAQATRDLVKMVGGPFYPVRLGRKDSLVSDASRTDESLPTTTMTMDDIIKKFTIKNFTIREMVALTGAHTIGFTHCKEFSNRIFNYSKTSEIDPTLHPKLAAGLRRVCQNYTSDPSMAAFNDVRSPGKFDNAFFQNVLKGLGLLTSDYLLAVDPRTKPIVELYAKDERAFFQDFAKAMEKLSVHGVKTGKKGEVRSRCDQFNHIPN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02328 333 ProSiteProfiles Plant heme peroxidase family profile. 26 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 FunFam Peroxidase 30 178 - -
Vifa3g02328 333 Gene3D - 30 329 - -
Vifa3g02328 333 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vifa3g02328 333 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PANTHER - 9 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 FunFam Peroxidase 166 308 - -
Vifa3g02328 333 Gene3D Peroxidase, domain 2 166 308 - -
Vifa3g02328 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vifa3g02328 333 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa3g02328 333 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Vifa3g02328 333 Pfam Peroxidase 54 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02328 Vifa-Chr3 594877759 594878760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02328 10 331 Peroxidase AT5G47000 56.308 1.07e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02328 K00430 - gmx:100795676 531.561