Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02312 ATGACAAGAATGCCAGGCTATCCTGTCGCTGATGGCGAACTATGTAATTTTACAATCACAGATCAACAACCTAGCTCTCTAGATGCTTGTGCACAATTATCTGCAGAAGAGAAACTTGCTGCAGAACAGAGTCTTTCAGTTTTTTGCAAGCCTGTAGAGTTCTACAACATTCTTCATCACCGTGCAACAGAAAGCGCAGCACCACTTTTCCTTCCGAGATGTTTTCAGTACAGGATACAGGCCAGGGACAACAAAAGGATACGAATAGCAGTTTTTCTGTCATGGAGTGATGAAGAAATTCAAAACATGTTTCCTTTTTATGTCAGTCTAGCAAGGCGTGATCCTAATAATAAAGACGCTGATATAGTCACCATTCGAGGTTCATCCGACGTTGATGGGAACAGAATAATCACAGCAGAATTTAAGCTTTGTGAAGTTAATAAGTTAGCTGCGGAGGCTAATTCTGGCTCACTTTTTCTCTTGTTTTTTACCACTGAGGGGAACTCAGTTTCATCATCTAGAGTCAAAGAAAGCCTGGGGCCTTTAGATCCGACTTCTCATGAATCATTAGGTGAAAAGGACTGCTTATATGGGAAAATTTCTTTTCAATCCATTTACTTTGCTTGGAAAAATTCTCCAAATTTTCGTTGGGGACAACCAGCCCAGATTAAGACTACTCTTGATCTGCTTCCATGTGTTTTGAAGTATGACTTTGTAAATAAGGGTACAACCATCGCAATCCAAGATCTATGGAATTCTGAGATTGTGAGTATATCAAAGAGCGTTGAAATCAGAATCATTGCTGAAGAGATCAAGGCCATGGAGAAATCTTGCAACCGTAGAAATGCATTACCATCATCATCAAGATCATCATCATCTCGTGTCATTCGGTTGAGAGAAGGAAATGTGACATTTAATTACAGGTATTACAATAACAAATTACAGAGAACAGAAGTCTCTGAAAATTTCTCCTGTCCATTCTGTTTGATTAAATGGGGAAACTATAAGGGTCTAAGATGTCACTTGCTCGCATCACATGATCTTTTCAAATTTGAATTTTCGGCATCGGAAGATTGTCTGGCTGTTAATGTGTCTCTGAATTTTGACATATGGAGATTTGAGCTTGTTGGAGATGGTGTTGATCCAAAATTGCAAACTTTTTTCCTTCATGGCAAGCGAATGACACAAATAAGTCCAGAAAATGCATGTTTTGAAGTGGTCCAGGATGTAGACTCACCGACCTTAGCTAATAATGCAGACCCACCGGCCTTAGCTAATAATGCAGACCCACCGGCCTTAGCTAATAATGCAGACCCGCCGGCCTTAGCTTTGGAAGCAGACCCGCCGGCCCTAGCAATGGACGAAGACCCGCCGGTCTTAGCAATGGACGAAGACCCTCCGGTCTTAGCTATTGATGTGGACTCACCGGTTTTAGCTATGGATGTGGACTCGCCGATCTTAGCTACGGATGCAGACTCACCAATCCTAGCTACGGATGCGGACCCGACGATCTTAGCTACGGATGCAGACCCGCCGGTATTAGCTACAGATGAGGACCCGCCAGTATTAGCTATGGATGCGGACTCGCCGGTCTTAGCTACGGTTGCGGACCAGCCGGTCTTAGCTACGGTTACAGACCCACCGGTCTTAGCTACGGGTGCGGACCCGCCGGTATTAGCAATGGATGCGGACCCACCGGTCTTAGCCGTGGGTGCAGATCCACCGGTCTTAGCCGTTGATGCAGACCCGCCGGTCGTAGCCGTGGTTGCGGACCCGCCTGTCTTAGCCGTGGATGCAGACCCGCCGGTCGTAGCCGTTGTTGCGGACCCACCTGTCTTAGCCGTTGATGCGGACCAGCCTGTCCTAGCCGTGGATGCGGACCAGCCTGTCCTAGCTGTGGATGCAGACCCGCCTCTCCTAGCTAGGAATGCAGACCCACCAGTCTTAGCTATGGATGCAGACCCACTATTCTCAGAGTCTGAAACTCCTTTAGGAGATAATGAGTTTTTAAAGAAGATTGATGGAAGTTCTGCAACTATATCAGGGGATGAAAATGCAAGTATTGTGTCCAATTCCAATCCAAACCGTGTCCCACTAATATCTAAGCATGATCATGGGACTCCTGCAGGGCTACAGATTGGCAATACAAGGAAGTTACCAGTTGAACATTTTGACCCACAAAACATAGCCCGGTTGACGAAGCGGCAGTTTTATCATTCTCACAAAGCTCAGGCAATGTCACTTGAAGAAGTTCTATCAAATTATGATAGTGAGGATGATGTTGATGATGAAGTTGCAGATATTGAAGAGCGGGTGAAGCTTGATCTTCATCCTTTGAGCAAAGAAGAGAAGCAATTCATGTTGATGTGGAACTCATTTATTCGGAAGCAACGTGTGCGGGTAGATTCTCACATTCGTTGGGCATGCAAGGCTTTCTCAGTATTGCATGGCTCTGAGATTGTTAAATCCCGCGAATTAACTTGGTATTGGACAATGTTCAGGATCAAATTATATAAGTTGGGTCTTATAGATGGAAAAATCGTCAATGATTGCAGTAATATTCTCGAACAACACGTGAAGCATAATTCAAATCCTGAGATCCCAGTAGCTAATATAAACTCCATTCATTTCTCCCCTCTTAAAAATAAAAGAAATAAGAAGATAACACAGAAATGA 2676 0.4439 MTRMPGYPVADGELCNFTITDQQPSSLDACAQLSAEEKLAAEQSLSVFCKPVEFYNILHHRATESAAPLFLPRCFQYRIQARDNKRIRIAVFLSWSDEEIQNMFPFYVSLARRDPNNKDADIVTIRGSSDVDGNRIITAEFKLCEVNKLAAEANSGSLFLLFFTTEGNSVSSSRVKESLGPLDPTSHESLGEKDCLYGKISFQSIYFAWKNSPNFRWGQPAQIKTTLDLLPCVLKYDFVNKGTTIAIQDLWNSEIVSISKSVEIRIIAEEIKAMEKSCNRRNALPSSSRSSSSRVIRLREGNVTFNYRYYNNKLQRTEVSENFSCPFCLIKWGNYKGLRCHLLASHDLFKFEFSASEDCLAVNVSLNFDIWRFELVGDGVDPKLQTFFLHGKRMTQISPENACFEVVQDVDSPTLANNADPPALANNADPPALANNADPPALALEADPPALAMDEDPPVLAMDEDPPVLAIDVDSPVLAMDVDSPILATDADSPILATDADPTILATDADPPVLATDEDPPVLAMDADSPVLATVADQPVLATVTDPPVLATGADPPVLAMDADPPVLAVGADPPVLAVDADPPVVAVVADPPVLAVDADPPVVAVVADPPVLAVDADQPVLAVDADQPVLAVDADPPLLARNADPPVLAMDADPLFSESETPLGDNEFLKKIDGSSATISGDENASIVSNSNPNRVPLISKHDHGTPAGLQIGNTRKLPVEHFDPQNIARLTKRQFYHSHKAQAMSLEEVLSNYDSEDDVDDEVADIEERVKLDLHPLSKEEKQFMLMWNSFIRKQRVRVDSHIRWACKAFSVLHGSEIVKSRELTWYWTMFRIKLYKLGLIDGKIVNDCSNILEQHVKHNSNPEIPVANINSIHFSPLKNKRNKKITQK 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02312 891 Pfam VEFS-Box of polycomb protein 719 853 IPR019135 -
Vifa3g02312 891 CDD VEFS-box_EMF2-like 732 858 - -
Vifa3g02312 891 PANTHER POLYCOMB GROUP PROTEIN 32 862 - -
Vifa3g02312 891 MobiDBLite consensus disorder prediction 415 443 - -
Vifa3g02312 891 CDD ZnB-Zn_EMF2-like 297 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02312 Vifa-Chr3 586487131 586515776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02312 711 857 C2H2 Transcription Factor Family AT5G51230 54.054 3.91e-37 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02312 - - psat:127098431 1300.03