Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02304 ATGGCGGTTGTAGTACGTTGTTCCTGCTACCTCATTCTCTCTCGCTCACACCTATTTTCTTCTGCCACCAAGAGGTCATCCTCCTCCATCCTCCCATCTTCGTCTGGAGCCTGTCGATTGCGAAAAGTTACTGTAAAATTTAAGACTTGCAACCAGATTGCTTTGGCTATAAAGAATGAGGTTGAGGATCTTGAGAAAGCCGGCGTTACTGTCATCCAAATTGGAACAGAATCTATGGTCTTCTTTTTCTCGATAATCCAATTGGAACTGGCTTCAGTGTATCCTAAACCCCACAAGAGATTCCAACCGATCAAAACGGAGTGTCAAAACACCTCCGCTGCCAGGAAGGATGACAAAGCCGTCAATGCCGCTCGTCGTTCCGGCGCCGATATCGAAACCATGAAGAAACATAATGCTGCGACAAACCCTTTTGGAAACGGGTACTTTCAGGGTCCTTCCGAGGCTCCTCTTGAAGCTGCTTCAGCTTGTCCAGGTGTTTATGGTAAAGGTGCTTACCCTGGTTATGCTGGTGACTTACTTGTTGATTCGACAACTGGTGCTAGCTACAACGCACACGGTGATAATGGAAGGAAGTATCTTCTTCCTGCTTTGTATGATCCTTCTACAGCTTCTTGCTCAACAATCGTGTGA 651 0.4654 MAVVVRCSCYLILSRSHLFSSATKRSSSSILPSSSGACRLRKVTVKFKTCNQIALAIKNEVEDLEKAGVTVIQIGTESMVFFFSIIQLELASVYPKPHKRFQPIKTECQNTSAARKDDKAVNAARRSGADIETMKKHNAATNPFGNGYFQGPSEAPLEAASACPGVYGKGAYPGYAGDLLVDSTTGASYNAHGDNGRKYLLPALYDPSTASCSTIV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02304 216 Pfam Multiprotein bridging factor 1 109 143 IPR013729 -
Vifa3g02304 216 Gene3D - 46 74 IPR038071 -
Vifa3g02304 216 PANTHER PROTEIN EXORDIUM-LIKE 5 138 215 IPR006766 -
Vifa3g02304 216 Pfam Cobalamin-independent synthase, Catalytic domain 42 74 IPR002629 GO:0003871|GO:0008270|GO:0009086
Vifa3g02304 216 Pfam Phosphate-induced protein 1 conserved region 138 214 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02304 Vifa-Chr3 583318530 583319955 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Vifa3g02304 Phi_1 8.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02304 - - rcu:8281668 157.532