Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02302 ATGGCAGATGTGAAACTGCATGGATTTTGGTATAGTCCTTTTAGTTTTAGGGTAATATGGGCACTAAATCTGAAAGGTATACCATATGAGCACATAGAAGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCAATATAATCCAGTATACAAAAAGACTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAGTCTATGCTCATTGTTGAGTATATTGATGAGATATGGCCACATAACTCATTGCTTCCTGCTGATCCCTATGACAAAGCTCAAGCTAGATTTTGGGTCAAATATGTTGATGAAATGTTTTCAGGAATTGCGGCACACTTTCGTAGCAGAAGTGATGAAGAGCGAGAGAAGGCAAAAGAGATTATATGGGAGCGGCTAGGAGTTGTTGAGGATAAGTGTTTGGGAGATGAGAAGAAATTCTATGGGGGAGACACCATTAACATTGTAGACATATTTCTTGGATCTTTTGTCAAATTTATTGAGGTTCAGGAGGATATGTTTGAAGTGAAGATCTTGCAAAGTGAGAGGTTCCCTCGTTTGAAATTATGGTTTACTAATTTCAAGGATGTTCCAATCATTAAAGAAAGCACCCCTGGTCAAGAGAAATTGGTGGCTTTTTTAAAGCCTCTTATTGAAAAAATCATGGCAAAGGAAAGGATGGCTTCTTTGAATTGA 687 0.3785 MADVKLHGFWYSPFSFRVIWALNLKGIPYEHIEEDRFNKSPQLLQYNPVYKKTPVLVHDGKPICESMLIVEYIDEIWPHNSLLPADPYDKAQARFWVKYVDEMFSGIAAHFRSRSDEEREKAKEIIWERLGVVEDKCLGDEKKFYGGDTINIVDIFLGSFVKFIEVQEDMFEVKILQSERFPRLKLWFTNFKDVPIIKESTPGQEKLVAFLKPLIEKIMAKERMASLN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02302 228 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Vifa3g02302 228 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Vifa3g02302 228 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Vifa3g02302 228 Gene3D Glutaredoxin 1 82 - -
Vifa3g02302 228 Gene3D - 83 223 - -
Vifa3g02302 228 CDD GST_N_Tau 4 77 - -
Vifa3g02302 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vifa3g02302 228 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Vifa3g02302 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 206 IPR045073 -
Vifa3g02302 228 FunFam Glutathione S-transferase GSTU6 1 84 - -
Vifa3g02302 228 SFLD Glutathione Transferase (cytosolic) 1 222 IPR040079 -
Vifa3g02302 228 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Vifa3g02302 228 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vifa3g02302 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Vifa3g02302 228 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Vifa3g02302 228 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02302 Vifa-Chr3 582125544 582126313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02302 4 220 Glutathione S-transferase Gene Family AT2G29470 43.379 3.38e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02302 K00799 - gmx:547584 314.694