Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02301 ATGCTCATTGTTGAATACATTGATGAGATATGGACACACAACTCATTGCTTCCTGATGATTCTTATGACAGAGCTCAAGCCCGGTTTTGGGTTAAATATGTGGATGACATGGAGGATATGTTTGAAGTGAAGATTTTGCAAAGTGAGAGGTTCCCTCGCTTGAAATTATGGTTTAGTAATATCAAGGATGTTCCAGCCATTAGAGAAAACACCCCTGGTCAAGAGAAATCGGTGGTTTTTTTAAAGCCTTTTCTTGAAAAAATGTTGGCAAGGAAATGA 279 0.3835 MLIVEYIDEIWTHNSLLPDDSYDRAQARFWVKYVDDMEDMFEVKILQSERFPRLKLWFSNIKDVPAIRENTPGQEKSVVFLKPFLEKMLARK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02301 92 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 41 IPR045073 -
Vifa3g02301 92 Gene3D - 14 36 - -
Vifa3g02301 92 Gene3D - 37 92 - -
Vifa3g02301 92 SUPERFAMILY GST C-terminal domain-like 9 88 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02301 Vifa-Chr3 582119782 582120402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02301 2 70 Glutathione S-transferase Gene Family AT2G29470 38.571 4.89e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02301 K00799 - gmx:547584 70.8626