Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02297 ATGGGAAAAGTTGTAACTCTCCAGGGAAGGTTCCAGATTATTTTGATATCTGGAATAATCTACTCACTGATGACGCCGGAGAATGATGAAGGGTTGATGATTAACTTGTCAGGAACTATAAGACAAGTAGTCGGAGGGACTACGATTCCTCCTCTTGTTGCTTTGGACTCGGTGGTGTTAATGGTGGCTTCCTTTGTAAACTCTGAATTTGAAAGAGTTTCTTTGGAAACATATAAACAAGATAATGTGATGTTGTTTAATGTTGAAGGATCAACAAATGAGATAAGGACTACGATGAATATCGACCCCAATTTTCTGTCCTTCTCTACTCAGGGTTGTAGTACTGCAACTGCAACTTTACTATCCAGATCTTCCGCTTCTAGCTAG 387 0.3979 MGKVVTLQGRFQIILISGIIYSLMTPENDEGLMINLSGTIRQVVGGTTIPPLVALDSVVLMVASFVNSEFERVSLETYKQDNVMLFNVEGSTNEIRTTMNIDPNFLSFSTQGCSTATATLLSRSSASS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02297 128 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 79 - -
Vifa3g02297 128 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 82 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02297 Vifa-Chr3 581396635 581397021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02297 2 76 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 48.000 1.94e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02297 - - psat:127095716 143.665