Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02267 ATGGCTGGAAGTAATGAAGTCAACCTTAATGAATCTAAGAGTGTTGTTCCTCTTAATACTTGGGGTGCTTATCTCCAATGTTCAACTAATAGTGCTATCTATGACACTTTCTGTCGTCGCCTTGTGAGCATGTGTAAGGCTGTTGTTGTTTCTGTAAACTACCGAAGATCGCCCGAGCATCGGTTTCCGTGTGCTTATGAAGACGGTTGGAATGCACTTAATTGGGTTAAATCAAGGACATGGCTTCAAAGTGGAAAAGATTCTAAGGTTTATGTCTACATGGCAGGGGATAGTTCAGGTGGTAACATTGCTCATCATGTCGCAATCGCGATTGGTATTGGAGAGCTTTTCTACCCGAAGGAGAAGATAGAGTACCATCCTGCTTGTAATCCATTTGGCCCTAATGGTAAAAGCCTGGAAGGACTAAAGTTTGCTAAAAGCCTTGTTTGTGTGGCTGGTTTGGATCTTCTACAAGACTGGCAATTGGAATATGTGGAAGGTCTCAAGAATTATGACCAAGATGTTAAACTTCTTTACCTAAAGGAAGCAACTATTGGTTTCTACTTCTTGCCTAATAATGATCATTTCTATTGCCTCATGAACGAGATAAACACCTTCGTGCATACCTAA 630 0.4111 MAGSNEVNLNESKSVVPLNTWGAYLQCSTNSAIYDTFCRRLVSMCKAVVVSVNYRRSPEHRFPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAIAIGIGELFYPKEKIEYHPACNPFGPNGKSLEGLKFAKSLVCVAGLDLLQDWQLEYVEGLKNYDQDVKLLYLKEATIGFYFLPNNDHFYCLMNEINTFVHT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02267 209 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 92 104 IPR033140 -
Vifa3g02267 209 Gene3D alpha/beta hydrolase 1 112 IPR029058 -
Vifa3g02267 209 Gene3D alpha/beta hydrolase 113 208 IPR029058 -
Vifa3g02267 209 SUPERFAMILY alpha/beta-Hydrolases 22 208 IPR029058 -
Vifa3g02267 209 PANTHER ARYLACETAMIDE DEACETYLASE 116 182 - -
Vifa3g02267 209 Pfam alpha/beta hydrolase fold 115 188 IPR013094 GO:0016787
Vifa3g02267 209 Pfam alpha/beta hydrolase fold 22 110 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02267 Vifa-Chr3 572569424 572571190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02267 22 209 Carbohydrate Esterase AT3G63010 58.952 4.83e-93 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02267 K14493 - cit:102618248 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02267 3 572569424 572571190 Vifa3g02267 3 572569424 572571190 ECH
Vifa5g02496 5 827489668 827490817 Vifa3g02267 3 572569424 572571190 ECH
Vifa5g02496 5 827489668 827490817 Vifa3g02267 3 572569424 572571190 PCT