Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02204 ATGGTCAGAAAAATATCATACCTTACCTTACTGCTTGCATTTTTATTTCTTTCATTCCTTGCAAATACTAGCCAGTTGGCATTTGCAAAAGGGACAGACAATGTCAGAGAAGCTTGCAAAGTAACTAGGTATCAAAACCTTTGTATGCGCTCGCTAGCACCGTTCTCTAACAGTGCTGGAGGAAGCCCTAGTAAGTGGGCAAGGGCAGGAGTGTCGGTTACAATCGGAGAGGCTAAGAATGTTCAAGCTTATCTGTCAAGCTTCAAGAGGCGCGAGCATTTAAGAGGAAGAGATAAAGTTGCACTTTTAGATTGTGTTGAGACTTTTGCAGATGCCATCGACGATCTTCATAGGTCACTGAATGTGCTCAGAAGGCTTAGCAGAAGCACATTTGGTACTCAAATGGGGGACCTTAATACATGGTTAAGTTCAGCACTCACAAATGAAGATACCTGCCTTGATGGGTTTCAAGGCAAAAATGATAGGAAAATTAAATCGCTGCAAAATAAGGTTCGCAAGGTTTATTATGTTACCAGTAATACTCTAGCTCTTGTCAACAAACTTGCCACTACAGGTCTAGGAAGCATGTCTGATCCATAG 600 0.4183 MVRKISYLTLLLAFLFLSFLANTSQLAFAKGTDNVREACKVTRYQNLCMRSLAPFSNSAGGSPSKWARAGVSVTIGEAKNVQAYLSSFKRREHLRGRDKVALLDCVETFADAIDDLHRSLNVLRRLSRSTFGTQMGDLNTWLSSALTNEDTCLDGFQGKNDRKIKSLQNKVRKVYYVTSNTLALVNKLATTGLGSMSDP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02204 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 184 - -
Vifa3g02204 199 FunFam Pectinesterase inhibitor 3 30 189 - -
Vifa3g02204 199 SMART PMEI_2 30 184 IPR006501 GO:0004857
Vifa3g02204 199 Pfam Plant invertase/pectin methylesterase inhibitor 34 184 IPR006501 GO:0004857
Vifa3g02204 199 CDD PMEI-like_3 38 190 - -
Vifa3g02204 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 190 IPR035513 -
Vifa3g02204 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 188 IPR035513 -
Vifa3g02204 199 NCBIfam pectinesterase inhibitor domain 7 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02204 Vifa-Chr3 552676527 552677126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02204 35 193 Carbohydrate Esterase AT3G14310 33.533 2.91e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02204 - - gmx:100791264 235.728