Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02197 ATGGTTGGGTTCTTATCCAATATTCTAGGGAATGATTTGAAATGTGAAAGCTACTTTATTTTTAGTGGAGAAACTGATCTTGGGAATAATGTTAGGATGTTTTTGTATTTTCTTGCTCTTGCTTATTGTTTTATTGGGTTATCGGCTATAACGGCGCGATTCTTTCAATCTATGGAAAACGTGGTGAAGCACACACGGCAGGTTGTGGTGATTGATCCTGTTACTAAAGGTGAAATCATTACACATGAGAAAGTTTGGAATTATACTATTGCAGATATTAGCTTGTTGGCGTTTGGAACTAGCTTTCCTCAGATTTCCTTGGCTACTATTGATGCTATACAGAATTTAGGGAACTTGTATGCTGGAGGTTTGGGACCTGGAACACTCGTTGGTTCTGCTGCATTTGACCTCTTCCCCATCCACGCTCTTTGTGTGGTTATTCCAAAAGCAGGAGAATTGAAAAAGATTGCTGATCTAGGAGTATGGATAGTGGAATTATTTTGGTCCTTTTGGGCTTACTTTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTGATAACTCTGTGGGAGGCCTTGTTGACTGTACTTCAGTATGGATTATTGTTGATTCATGCTTATGCTCAAGATAAACGTTGGCCCTATATTTCTCTACCCATTGCAAGAGATGAAAGGCCAGTGGATTGGGTGCCGGAAGAAACTCCTAAACAAAAGTCCGAAGAGATAGTGGAGTGCTCTGAGATATTTAATTTTATTGAAGAAAATAGGGACACTGTTGATATTTTTTCCGTTCATTCAGAAAACTACAGAGATGGGTCATACATAAGAGTGCCACAAATAGAGGAAGCAGAAAATTCGGACAAACTTATGGAAACAGAGCTGGAGGATACCGGTTTGCTTACTATATGGAGACATCAATTTGTTTATGCCCTGACGGTGGGGAGCCAAGAATCCAAAAAGATGAACAATATATATACCCGCATAGCTAAAATATTCTGGCAGTTGTTGCTTATGCCATGGAGATTTATGTTTGCTTTTGTTCCCCCGTGCCATATTGCTCATGGATGGATTTCTTTCATCTGCTCTCTGCTTTTCATCAGTTGGATAGCATATATTGTGACTAAGATAACGGATCTTATAAGTTGTGTTTCAGGAATAAATGCTTATGTCATAGCATTTACAGCACTAGCCTGTGGAACCTCATGGCCTGATTTAGTGGCGAGCATGATTGCTGCTGAACGTCAAAAAACAGCAGACTCTGCAATTGCTAACATTACTTGCAGCAATTCAGTGAATATATACGTTGGCATTGGTGTTCCATGGCTTATTAATACTTTGTACAACTACATAGCATATAGAGAACCTCTCCGAATCCAAAATGCAGGGGGACTTAGTTTTTCATTGATTGTTTTTTTTGCCACTTCTGTTGGATGTATCTCAGTTTTGGTTGCTAGGCGTATAGTTTTTGGTGCAGAGCTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGTGCATTTTTCATGCTGCTGTGGTTGATTTTTGTTGTACTATCATCACTTAAAGTTTCCGGATTCTTTTAG 1584 0.3946 MVGFLSNILGNDLKCESYFIFSGETDLGNNVRMFLYFLALAYCFIGLSAITARFFQSMENVVKHTRQVVVIDPVTKGEIITHEKVWNYTIADISLLAFGTSFPQISLATIDAIQNLGNLYAGGLGPGTLVGSAAFDLFPIHALCVVIPKAGELKKIADLGVWIVELFWSFWAYFWLYIILEVWTPNVITLWEALLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPVDWVPEETPKQKSEEIVECSEIFNFIEENRDTVDIFSVHSENYRDGSYIRVPQIEEAENSDKLMETELEDTGLLTIWRHQFVYALTVGSQESKKMNNIYTRIAKIFWQLLLMPWRFMFAFVPPCHIAHGWISFICSLLFISWIAYIVTKITDLISCVSGINAYVIAFTALACGTSWPDLVASMIAAERQKTADSAIANITCSNSVNIYVGIGVPWLINTLYNYIAYREPLRIQNAGGLSFSLIVFFATSVGCISVLVARRIVFGAELGGPRLWAWITCAFFMLLWLIFVVLSSLKVSGFF 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02197 527 Gene3D - 307 521 IPR044880 -
Vifa3g02197 527 Gene3D - 88 225 IPR044880 -
Vifa3g02197 527 PANTHER SODIUM/CALCIUM EXCHANGER 13 252 - -
Vifa3g02197 527 Pfam Sodium/calcium exchanger protein 356 519 IPR004837 GO:0016020|GO:0055085
Vifa3g02197 527 Pfam Sodium/calcium exchanger protein 36 208 IPR004837 GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02197 6 525 Antiporters AT2G47600 69.962 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02197 K03452 K05849 gmx:100792839 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02197 3 550636834 550641663 Vifa3g02197 3 550636834 550641663 ECH