Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02110 ATGTACTATATGAAGTTGAAGAATAAGCGTGGTTTATTAACTTCAGATCAAACATTGGCTGATAGTGACTTAACAAAGAGAACGGTGTTAAAAAATGACAGACATAATGCAATATGGAGAGTGAAGTTTGCAAAGGCCATGGTGCATATGGGTTCCATACAAGTCTTAACAGGTTTTCAAGCAAAGCTTCACCGCCACCGCCACCGCCACCGCCACCGCCACCATCAACCCATTGCGCCGCCGTCAACATTTCTCCATCACAGAACAAAGGTTCTTTTAACGTGGAAATTCTTGATTTTCAACTTTCATTTCGTTTGA 318 0.4182 MYYMKLKNKRGLLTSDQTLADSDLTKRTVLKNDRHNAIWRVKFAKAMVHMGSIQVLTGFQAKLHRHRHRHRHRHHQPIAPPSTFLHHRTKVLLTWKFLIFNFHFV 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02110 105 PRINTS Plant peroxidase signature 5 22 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02110 105 PRINTS Plant peroxidase signature 45 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g02110 105 Gene3D - 51 64 - -
Vifa3g02110 105 ProSiteProfiles Plant heme peroxidase family profile. 1 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g02110 105 SUPERFAMILY Heme-dependent peroxidases 2 65 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa3g02110 105 Gene3D Peroxidase, domain 2 2 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02110 Vifa-Chr3 523012489 523013737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02110 2 69 Peroxidase AT5G17820 33.824 9.02e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02110 K00430 - cit:102620525 83.1889