Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02078 ATGAGAATGAAGCTGTTGATTTTGTTTGCATGCTTACTTTCTGGGTTTATCTCCTCTAGATCTCAGACACTGTTTTCTTTCTCACAAAACGATGTCGTTTCACCTAATCCTTTGGAGCTTCTCATGGTTAATCTCACTCTCATTCAAGGAGCTGATTCCGGAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGAATCTGGTGCAAATAGTTGGCTTATTCATCTTGAGGGAGGAGGATGGTGTAACACTATCAGAAATTGTGTGTATAGAAAAAAGACTCGGCGTGGTTCCTCAAAATACATGGAAAATCAAATACCATTCACGGGAATATTGAGTAATAAACCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGAGCATCTTTTACTGGAGACAGTGAAAATGAGGCTGCAGGACTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATAGAGGAATTGATGTCTCAAGGAATGGATAATGCCGAACAGGCTCTTCTCTCTGGATGTTCTGCGGGTGGCCTTGCATCCATAATACATTGTGATGAGTTCCAGAGCTTGTTGCCAAAATCTTCCAAAGTGAAGTGTTTTAGCGACGCCGGATTTTTTCTTGATGCAATTGATGTATCTGGAGGGCGCACATTGAGAAATCTGTTTGGAGGCGTAGTTCAGTTACAGGAAGTACAGAAAAATCTGCCAAAAAATTGTCTCAACAAATTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTTGAACATGTTGAGACACCACTGTTTCTACTCAATGCGGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCAGCGACAGCTGATCCTCTTGGCGCTTGGAATGACTGCAAATCAAACCATGCAAACTGTAGCTCGTCTCAGATTCAGTTCCTCCAAGACTTCAGAAATCAAATGGTTGACGATCTAAAAGACTTCTCAAGACCATCTCAAACTGGACTGTTCATAAATTCCTGTTTTGCTCATTGCCAGTCGGAGAGACAGGAGACATGGTTCGCAGATGACTCTCCTCTTCTCGAGGACAAGCCAATTGCAGTTGCTGTTGGAGACTGGTATTTCGACAGAGAAGTAGTCAAATCTATTGACTGTCCATACCCTTGTGACAATAATTGCCATAATTTGGTGTTTAGAAGAGTATAA 1227 0.4205 MRMKLLILFACLLSGFISSRSQTLFSFSQNDVVSPNPLELLMVNLTLIQGADSGGAVCLDGTLPGYHLDRGFESGANSWLIHLEGGGWCNTIRNCVYRKKTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFTGDSENEAAGLQFRGQKIWLAAIEELMSQGMDNAEQALLSGCSAGGLASIIHCDEFQSLLPKSSKVKCFSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEVQKNLPKNCLNKLDPTSCFFPQNLVEHVETPLFLLNAAYDVWQVQASLAPATADPLGAWNDCKSNHANCSSSQIQFLQDFRNQMVDDLKDFSRPSQTGLFINSCFAHCQSERQETWFADDSPLLEDKPIAVAVGDWYFDREVVKSIDCPYPCDNNCHNLVFRRV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02078 408 Pfam Pectinacetylesterase 41 386 IPR004963 GO:0016787
Vifa3g02078 408 PANTHER NOTUM-RELATED 22 402 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02078 Vifa-Chr3 518450790 518453478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02078 28 407 Carbohydrate Esterase AT1G57590 69.474 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02078 K19882 - gmx:100786972 713.375