Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02056 ATGGTGAAGCTTTTCTGGCCTCGCATGGTGGGAATCACCTTTATTCAATCTGCTGCTGCTAAAGGAGCTGTCTGCTTGGATGGAACATTGCCTGCTTATCATTTCGACCGCGGATACGGATCGGGAGCAAACAGCTGGATTGTTAACTTAGAGGGAGGTGCGTGGTGTAATAACATTAGAACATGCGTTTATCGCAAGACTACACGGCGTGGATCATCAAATTTCATGGAGAAGGCGATACCTTTTACGGGAATAATGAGCAATAATCCTCGAGAGAATCCAGATTTCTTTAACTGGAATAGAGTGAAAATTCGTTACTGTGATGGTGCTTCTTTTACCGGTGATAGTGAAAATAGGGCTGCACGGCTGCAATTCAGAGGACAACGCATTTGGTTGGCTGCAATTGAAGAGTTGATGTCAAAGGGAATGCGTTATGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCTGGTGGTCTAGCTACGATTTTACACTGCGATGAATTTCGAGGTCTACTCCCGAGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGTTTGTTTCTTGACGCTGTTGATGTAGCTGGTGGACATACCCTCAGGAATTTTTTCAACGGTGTTGTAACCCTACAGGGAGCGCAGAGGAATCTTCCACGCGCTTGTAGTAATCATCTTGATCCTGCCTCGTGCTTCTTTCCTGAGAATGTGATCGCCGGTATCAGAACCCCGCTATTCATTCTTAATACAGCCTATGACTCATGGCAGGTCCAATCAAGCTTAGCTCCTCCAGCGAACGATCCCCGCGGCTATTGGCATGATTGCAGATTAAACCACGCTAAGTGTACTGGTTCACAAATTCAGTTTCTTCAAGGATTCAGGAATCACATGCTGAATGCTGTTAGAGGGTTCTCAAGATCAAATCAAAATGGATTGTTCATAAACTCATGTTTTGCTCACTGCCAATCTGAGAGACCAGACACATGGTTTGCTGACAACTCTCCTGTCATTGGAAACAAGGCAATTGCTCTGGCCGTCGGGGACTGGTATTTTGACCGAGCCGGTGTTAAGGACATTGATTGTCCTTACCCTTGTGATAACACATGCCACCATCTAGTTTTCAGATGA 1122 0.4572 MVKLFWPRMVGITFIQSAAAKGAVCLDGTLPAYHFDRGYGSGANSWIVNLEGGAWCNNIRTCVYRKTTRRGSSNFMEKAIPFTGIMSNNPRENPDFFNWNRVKIRYCDGASFTGDSENRAARLQFRGQRIWLAAIEELMSKGMRYAKQALLSGCSAGGLATILHCDEFRGLLPRTTKVKCLSDAGLFLDAVDVAGGHTLRNFFNGVVTLQGAQRNLPRACSNHLDPASCFFPENVIAGIRTPLFILNTAYDSWQVQSSLAPPANDPRGYWHDCRLNHAKCTGSQIQFLQGFRNHMLNAVRGFSRSNQNGLFINSCFAHCQSERPDTWFADNSPVIGNKAIALAVGDWYFDRAGVKDIDCPYPCDNTCHHLVFR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02056 373 PANTHER NOTUM-RELATED 7 369 IPR004963 GO:0016787
Vifa3g02056 373 Pfam Pectinacetylesterase 9 352 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02056 Vifa-Chr3 512555329 512558086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02056 9 373 Carbohydrate Esterase AT1G57590 70.959 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02056 K19882 - gmx:100782401 671.389