Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02034 ATGGGTATTACCGTAAATTCAGATTCAAAGCCAACAACAGTTGAGATCAAAGAGCTGAAATTCACCTATCCTGGAATCGACGGCCATCCTCCACCGGGTTCCAAACCTCTCATACAAGACTTCTCTCTCAACCTCTTCTCCGGTGATCGGTGCCTTCTCGTCGGATCCAATGGCGCCGGAAAGACTACGATTCTGAAGATATTAGGAGGGAAACACATGGTGGAGCCGGAAATGGTTCGTGTTCTTGGAAGATCGGCTTTTCATGATACTGCTTTGGAATCTTCTGGTGATTTGTGTTATCTTGGTGGTGAGTGGAGAAGAGATGTTGCTTTTGCTGGTTTTGAAGTTCCAATACAGATGGACATTTCTGCTGAGAAAATGATATTTGGTGTGGCTGGGATTGATCCTGAAAGAAGAGCAGAGCTGATCAAGGTATTAGATATCAATCTTTCATGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTGCAAATTTGTATGGGTCTCCTCAAACCATTTAAGGTTCTCCTGCTGGATGAGATAACAGTTGACCTTGATGTTCTAGCCAGAGCTGACCTTCTGAAGTTTCTAAGAAAGGAATGTGATGAGAGGGGTGCCACAATTATATATGCAACACACATATTTGACGGTCTTGACGATTGGCCAACAAATATTGTTTATGTAGCTCATGGAAGGCTGCAATTAGCAATGCCCATAGAGAAAGTCAAAGAAATTAGCAAACTGTCACTAATGAGAACGATAGAAGCTTGGCTACGAAAGGAACGAGATGAAGATAGAAGAAAAAGGAAAGAAAACAAGGCGGCTGGCCTTCCAGAATTTGAAAAGCAAGTTGATGGAAGTCGTGTAGTTGGGGGGGATCCAGCACGAGCTTCGGTTCGAGCTACTAATAATGGCTGGGCTGCAGGCCGGTTACATTCCACCATTGCTGGTGAGGAAAACTTCGTCCTAAGCTCAAACCGAGTATTGAGGGGGTAA 1002 0.4391 MGITVNSDSKPTTVEIKELKFTYPGIDGHPPPGSKPLIQDFSLNLFSGDRCLLVGSNGAGKTTILKILGGKHMVEPEMVRVLGRSAFHDTALESSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPERRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECDERGATIIYATHIFDGLDDWPTNIVYVAHGRLQLAMPIEKVKEISKLSLMRTIEAWLRKERDEDRRKRKENKAAGLPEFEKQVDGSRVVGGDPARASVRATNNGWAAGRLHSTIAGEENFVLSSNRVLRG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02034 333 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 13 259 - -
Vifa3g02034 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 257 IPR003439 GO:0005524
Vifa3g02034 333 Pfam ABC transporter 39 184 IPR003439 GO:0005524
Vifa3g02034 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 248 IPR027417 -
Vifa3g02034 333 Gene3D - 9 288 IPR027417 -
Vifa3g02034 333 SMART AAA_5 47 234 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02034 Vifa-Chr3 506435897 506438382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02034 14 211 Calmodulin-binding Proteins AT2G36910 24.651 1.94e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02034 K12608 - gmx:100782386 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02034 3 506435897 506438382 Vifa3g02034 3 506435897 506438382 ECH