Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02022 ATGTCCGACAACAAAAACACAGACCAATACGGCGTCCTCCTCTACTACAAATACGTCGATATTCCAAACCTCAACGACCTCCTCACATTCTACCGCTCCAACTGCTCCTCCCTCTCCCTCCTCGGCCGCGTCCGCCTCTCTCCCCACGGCGTCAATGTCACCGTTGGCGGCAGTTTATCCTCTTTGGAACAACACATCGAAGCACTCAAAGCCAATAATACTCTATTTCTCGGCACTGATTTCAAGCTTGCAACTTGTCATCACCCATTGAACGACGACGTTGCTAAGGAGTGTGGTTTCACTTCACTCTCGATTCGTGTTGTCAAGGAACTTGTTACTCTCAGTTCTCATCCACTGTTAAAGTCACCAGAAATCTCAAATGCTGGAACACATTTATCAGCACTTGAGTTCCATTCTACACTTCACAATGCTAATGAGAGTCCAGAAAACAGCCTTGTTTTACTTGATGCAAGGAATCTTTATGAAACAAGGATTGGGAAATTTCATGCACCGAATGTTGAAACTTTGGATCCACGGGTTAGACAATACAGTGATTTCTCCTCGTGGATAGATGATAGAAGCGAGCAGTTGAAAGGCAAAAATATCCTCATGTATTGTACTGGTGGAATAAGGTGTGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAAGGAAAGAATTTTGTTTTTGATCATCGGATATCAGTTGGAGGTTCAGAGGCTAGTAGTACAATTGGTACCTGTCTTATTTGTCAATGTTCCTTTGACGATTACTCTTCACGTTGTCGATGTACTCATTGCCGAATGCTTGTTTTGGTTTGTGAGAGTTGCCAGAACGAATCTGCACTGTATGTTTGTGAGCTATGCCAAAAACAGGGCAAGGCTGTTGGGCCAAAGCAGTTAAATGAAAACGATGATTCAAATAAATCATTACAAGGTGTTGAGTTCCTGGATTTTTCTTCAGATACCATGCTCTTGCCTCAGGAGCTTAGGGGAGATGACGTAAGAACCTCAAGAAAACTAAGAATCTTATGCTTGCACGGGTTTCGGCAGAATGCTTCCAGTTTTAAGGGAAGAACAGCATCCTTAACAAAAAAACTCAAGAAAATTGCTGAATTTGTTTTTATAGACGCACCTCATGAAGTGCCCTTCATTTATCAATCTCCTGTTCCAGTGCCCCATGTGAATGGTGCATCGTCCTCTTTAGCAGCAAGTCCTCCCCCACCTTTCGAGAATTGTAAGAAGAAGTTTGCATGGTTTGTGTCACCCAATTTTGATGGAAGTAGTGGCGTTGATTGGAAAGTAGCAGATGGTCCATTTGATCCACTTCAATACCAGCAGCAAACTGATGGATATGATATTTCAATATCACACTTAGAGAATGTATTCTCAAAAGAAGGGCCATTCGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGACTGCCGTAATCTCTGCACAACAAGAAAAGCTAAAAGGTAAAATGGACTTTAAATTTGTAGTCTTGTGTTCAGGCTTTGCTCTCAATTTGAAGGAGATGGAGTGTAACCCTATCAATTGCCCTTCTCTTCATATTTTTGGTAATGAACATGGTCAAGACAGACAGATAGCCAACCAAGCAAGCAAGGAACTTGCTTCTCTATATGACAGTAGTTGTTCTGTGATCGTTGAACATGACCGTGGTCACATAATTCCAACTCGGTCTCCTTATATTGACGAGATCAAGGCTTTCCTTGGGCGATTTCTGCATGACGTCTAG 1839 0.4231 MSDNKNTDQYGVLLYYKYVDIPNLNDLLTFYRSNCSSLSLLGRVRLSPHGVNVTVGGSLSSLEQHIEALKANNTLFLGTDFKLATCHHPLNDDVAKECGFTSLSIRVVKELVTLSSHPLLKSPEISNAGTHLSALEFHSTLHNANESPENSLVLLDARNLYETRIGKFHAPNVETLDPRVRQYSDFSSWIDDRSEQLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGGSEASSTIGTCLICQCSFDDYSSRCRCTHCRMLVLVCESCQNESALYVCELCQKQGKAVGPKQLNENDDSNKSLQGVEFLDFSSDTMLLPQELRGDDVRTSRKLRILCLHGFRQNASSFKGRTASLTKKLKKIAEFVFIDAPHEVPFIYQSPVPVPHVNGASSSLAASPPPPFENCKKKFAWFVSPNFDGSSGVDWKVADGPFDPLQYQQQTDGYDISISHLENVFSKEGPFDGILGFSQGAAMTAVISAQQEKLKGKMDFKFVVLCSGFALNLKEMECNPINCPSLHIFGNEHGQDRQIANQASKELASLYDSSCSVIVEHDRGHIIPTRSPYIDEIKAFLGRFLHDV 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02022 612 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 4 608 IPR020936 -
Vifa3g02022 612 FunFam esterase OVCA2 isoform X6 363 610 - -
Vifa3g02022 612 SMART rhod_4 138 245 IPR001763 -
Vifa3g02022 612 Pfam Rhodanase C-terminal 250 316 IPR022111 -
Vifa3g02022 612 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 118 262 IPR036873 -
Vifa3g02022 612 Gene3D alpha/beta hydrolase 363 611 IPR029058 -
Vifa3g02022 612 FunFam Rhodanese-like domain-containing protein 6 1 112 - -
Vifa3g02022 612 SUPERFAMILY alpha/beta-Hydrolases 369 610 IPR029058 -
Vifa3g02022 612 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Vifa3g02022 612 Gene3D - 121 276 IPR036873 -
Vifa3g02022 612 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Vifa3g02022 612 Pfam Serine hydrolase (FSH1) 365 600 IPR005645 -
Vifa3g02022 612 Gene3D - 1 112 - -
Vifa3g02022 612 ProSiteProfiles Rhodanese domain profile. 148 248 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02022 Vifa-Chr3 504359649 504363942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02022 5 609 Sulfurtransferasese or Rhodanese AT1G09280 63.651 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02022 - - mtr:25484701 1122.84