Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02018 ATGGATTCATTCGAACAATCACACACTTTGCAAGAATCCAATCACAAAAAACGCCGCAAAATCGGCGACACCACCGCCGATCAAAACTCCCTCACTCTCATGCGGTGGAGATCTGAATCCGACCAGAACAACTACTCCAAAAAACTAATCGAAGCTCTCAGCCGGATCAACTCTCCAACAACCACCACCAAACCTAGAGCCGCTTCTCAAGTCCGCGAAACCGCCGATCGCGTCCTCGCCAAATCCGCCAAAGGAAGAACACGCTGGAGCCGCGCGATTCTCGGAAAATGGAAGAAACTTCATAGACACCACAGAAAAGTCAAGAAAGCCGCAACCGGATTGAACAGAACCGGAATCGTAAGAGAGAGGTTACCGGCTGTGCAGAAGAAAAACACGCGTGCTCGGCCGATGCAAGTGCGTGCTATGACTGCTCTCGCTGAGCTTCTCGCCGGTCGAACATCGGCTGGACTCGCCGGTCATGTGTTGAGTTGA 492 0.5203 MDSFEQSHTLQESNHKKRRKIGDTTADQNSLTLMRWRSESDQNNYSKKLIEALSRINSPTTTTKPRAASQVRETADRVLAKSAKGRTRWSRAILGKWKKLHRHHRKVKKAATGLNRTGIVRERLPAVQKKNTRARPMQVRAMTALAELLAGRTSAGLAGHVLS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02018 163 MobiDBLite consensus disorder prediction 1 26 - -
Vifa3g02018 163 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 124 IPR044660 GO:0006355
Vifa3g02018 163 MobiDBLite consensus disorder prediction 9 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02018 Vifa-Chr3 502766402 502766969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02018 4 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 35.616 2.28e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02018 - - gmx:100783462 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02018 3 502766402 502766969 Vifa3g02018 3 502766402 502766969 ECH