Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01998 ATGGTTTGCAAGGAAGATCTATTGATCGAACAAGTCTGCGAGCTGTACGAACAAATCTCAAGCTTAGACACACTCAAACCCTGCAAAAATGTTGACACACTTTTCACCAAACTTGTTCTCACATGCATGCCACCTAGTCCCATTGATGTTGCCAAACTAAGCACAAAAGTTGAAGAAATCAGATCCAAACTCATAAGGCTGTGTGGTGAAGCTGAAGGCCATTTAGAAAGCCACTACTCAACCATCATAGCTTCATACAATAATCCACTCAATCATCTCAACATTTTCCCATATTATTCAAACTACCTCAAGCTTAGTCTCCTTGAATTCAATATCCTAACCAAACACTCCACTAATCTCCCTAAAAAAGTTGCTTTTATTGGCTCAGGTCCACTTCCACTTACTTCACTTGTCTTGGCCTCAAACCACTTGCAAAACACAGTCTTTCACAACTATGATATTGACCCTTTAGCCAATTCCAAAGCCTCTTGCTTGATTTCCTCTGATCCGGAATTATCAAAGCGTATGATTTTCCTTACCAATGATATTTTAGATGTTTCTAATGCTTTGAAAGAATATGAAGTTGTGTATTTGGCAGCACTCGTTGGAATGAATGTTGAGGAAAAGAATCGAATCATTGATCATCTGGCTAAGAACATGGCACCGGGAGCACTCCTGATGCTCAGGAGTGCTCACGGTGCTCGTGCTTTTCTGTATCCGGTTGTTGATACTAGTAATCTTCCAGGTTTTGAGGTCCTCTCTGTGTTTCATCCGACGGACGAGGTTATCAATTCAGTTGTCATAGCAAGGAAGTATCCCATGGTTCTGTTACCAAACAAGTACTGTTGTTCTGATGAGGTTCAAGCTTTCAAACCACTGATCAACCATGGGATTGAGGAATTGGTTGTTGAAGATAATTAA 921 0.405 MVCKEDLLIEQVCELYEQISSLDTLKPCKNVDTLFTKLVLTCMPPSPIDVAKLSTKVEEIRSKLIRLCGEAEGHLESHYSTIIASYNNPLNHLNIFPYYSNYLKLSLLEFNILTKHSTNLPKKVAFIGSGPLPLTSLVLASNHLQNTVFHNYDIDPLANSKASCLISSDPELSKRMIFLTNDILDVSNALKEYEVVYLAALVGMNVEEKNRIIDHLAKNMAPGALLMLRSAHGARAFLYPVVDTSNLPGFEVLSVFHPTDEVINSVVIARKYPMVLLPNKYCCSDEVQAFKPLINHGIEELVVEDN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01998 306 PANTHER NICOTIANAMINE SYNTHASE 3 4 273 IPR004298 GO:0030410|GO:0030418
Vifa3g01998 306 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Vifa3g01998 306 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Vifa3g01998 306 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01998 Vifa-Chr3 500543230 500544150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01998 1 279 Nicotianamine Synthase Gene Family AT1G09240 62.057 3.53e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01998 K05953 - gmx:100803630 454.907