Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01923 ATGGCTGATTTTCAGACATCTACCCACCGAGCCAGGTGGATCTTTTCTCCACAACAACTGGTTGAGAAATATACAGCTGCTAATCAGAGAGCCAGACAAACCCTAGAGAAGTGTGGAGCATCTCTAATGGAAGTAGATAGTAACGGGTCTTTGTCATATCCTGAACCCCAGACAACCGCAAGCGATAGTGCTGAAAAACATTCTCGGGTAAAACCTCTTAGTAATGAAGAAGAACGATGTATGAAGGTATTTTATGAAATTAAGCTACAAGAAGTGTGCAACAATTTCCACTTCCCTCATAAGATCCAGGCTACAGCCCTCATATTTTTTAAAAGGTTCTATCTGCAATGGTCGGTGATGGAGCATCAACCCAAAAATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCGGCTGAGGAGCTTGGTAAGGGGATTTCGCAAGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTCTGGATTTTGATCTTATAGTTTATGCTCCATATCGCTCAGTTGAAGGTTTTACAGATTATATGGAGGAGTTTTGCAATGCTGGCGAGGACGAGCTTCCAAAATTCAAGGCTTTGCAAGATACGGCTGGGCGGGAAGTTGATAAAATGATGCTTACAGATGGCGCCACTCTTATTTACTCCTGGGCAGTCTGTTTCATCCCAACGCAGTTGGCCTTGGCCGCTCTACGTACCTCAAATGCACTCCATAAAGTTGTCGACTTTGATAGTTTTCTGAGCAGAGTTTTTTCCCTTAAGAGTTCTACACACACAATGGACGAACTTCTTGAATCATTGGATGCAATTGATTCTTGGGTTAGAAAATACGTAAGTCCGTCAGAGAAGGAATTGAAGCATATCGACCGGAAACTGAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGGGAAAGAAAAGGGAGAAGAAATCAAAGCACAAGTCCAGAAAGAGCTCAAAAGAAGCTCAAAATGTGTAG 1017 0.4169 MADFQTSTHRARWIFSPQQLVEKYTAANQRARQTLEKCGASLMEVDSNGSLSYPEPQTTASDSAEKHSRVKPLSNEEERCMKVFYEIKLQEVCNNFHFPHKIQATALIFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLDFDLIVYAPYRSVEGFTDYMEEFCNAGEDELPKFKALQDTAGREVDKMMLTDGATLIYSWAVCFIPTQLALAALRTSNALHKVVDFDSFLSRVFSLKSSTHTMDELLESLDAIDSWVRKYVSPSEKELKHIDRKLKSCWGHSSHDEGKKREKKSKHKSRKSSKEAQNV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01923 338 Gene3D - 63 175 - -
Vifa3g01923 338 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Vifa3g01923 338 MobiDBLite consensus disorder prediction 47 72 - -
Vifa3g01923 338 PANTHER CYCLIN 31 331 IPR043198 GO:0006357|GO:0016538
Vifa3g01923 338 SUPERFAMILY Cyclin-like 179 312 IPR036915 -
Vifa3g01923 338 SMART cyclin_7 87 168 IPR013763 -
Vifa3g01923 338 MobiDBLite consensus disorder prediction 47 61 - -
Vifa3g01923 338 CDD CYCLIN_AcCycH_rpt2 177 311 - -
Vifa3g01923 338 Gene3D - 177 289 - -
Vifa3g01923 338 FunFam cyclin-H1-1 63 175 - -
Vifa3g01923 338 MobiDBLite consensus disorder prediction 308 338 - -
Vifa3g01923 338 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Vifa3g01923 338 Pfam Cyclin, N-terminal domain 70 174 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01923 Vifa-Chr3 490469362 490473469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01923 1 287 Core Cell Cycle Gene Families AT5G27620 60.279 5.10e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01923 K06634 - gmx:547736 534.258