Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01914 ATGAATATAGCCGTTGCAACCATTTCATTTCAAACTTTGAATTCTAGAAATTCTTCACTAGCAAAAATTCAAAAAACGCACTGTTTCTCATTTCTGCGAAAAAGATCTTACATCTCTTTGCTTTCATCTTTCAGATTCATCTTCTTCTTCTTTCACAAAACCCATGGAAATGACCGATCAAAGCGTTCAAATTCAATTGGCTTTGCCGAACGATTTCAACTCTTTGTACGAGATTGCGAACTCAAGCAATCGCCAAACGCTCTTCCCTCCGATAATGATGAATCGAATGAAGTAAACGAAAACTCTGATTTGATAGACGAAAACAGCATTTCTAATGGAATCCATGAGAATTCACCGGATCTAGGTCATACGCTTCCGATCTTGAAGAAAATACTTGATCTGAGTACCAAAGTTCAGTATTTGAAGAAGGAGCACGTAGCCTTATCTGATCATGTGAAATTCACAACAGAGTCGTTTTTGGGCCTTGATGCTTTTAACTCTATTCAGCTTCTCGGTTCTGAATACGAACTCTTGAAAAAGAAGTATCTCGATGAATCTTCTGAGCGAAAGAGGCTTTACAATGAAATAATTGAAATTAAGGGTAATATCAGGGTTTTCTGCAGATGCAGACCTTTAAGTGTAAGTGAAACCGGAAACGGGTATACATCTGTTGTCAATTTTGAATCGACTCTGGACAATGAGCTTCAAGTCATTACTCAGATTCTTCCAAGAAGCCATTTAAATTTGATCATGTCTTTAAGCCTGAAGACAACCAAGAGGCTGTTTTTTCGCAAACTAAACCTATTGCAACATCAGTATTGGATGGTTTTAATGTCTGTATATTTGCTTACGGACAAACTGGAACCGAAGTATCAGTTGCATGTTAGTATGCTGGAGGTGTACAATGAGAAGTTGAGAGATCTTTTGGTGGAAAATTCTGCCCAGCCGAAGAAATTGGAGATAAAGCAATCTGCCGAAGGAACACAAGAAGTCCCAGGACTTGTTGAAACTCAGGTGCATGGAACAGAAGATGTGTGGGAATTGCTCAAGACTGGAAACAGAGTCAGATCTGTTGGATCCACTTCTGCTAATGAGCAGAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACTGTTGTCGGGGAGAGTTTAATTAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCAGGAAGTGAGCGTGTGGGAAAAACTGAAGCCGAGGGAGAAAGACTGAAGGAATCTCAGTTCATTAACAAGTCTCTTTCGGCACTTGGCGATGTTATTTCTGCACTTGCTTCCAAAGCAGCCCACATCCCTTACAGAAACTCAAAGCTTACTCACATACTGCAGAGCTCTTTAGGAGGAGATTGTAAAACCTTAATGTTTGTCCAAGTTAGTCCAAGCTCAGCGGACTTAGGAGAGACACTATGTTCGCTGAATTTCGCCACTCGTGTCCGAGGAATCGAGAGTGGTCCTGCTCGCAAACAACTAGACATCGGCGATCTGTTTAAGTTCAAGCAAATGGCAGAAAAGGCCAAAAATGACGATAAGGAAATAAAGAAACTACAGGAGAGCCTGCAATCCTTGCAAATCCGGTTTTCCACGAAAGAATTTACTTGTAAAAGCCTTCAGGAAAAGGTACGGGACCTTGAGAATCAGCTAGCAGAAGAAAGAAAAACTAGACTAAAGCAAGAAAATAGATCACTTGCTTCTGTTTCAGCTCAACCACCAACGTTTTTTAAACACAAAACCGTGACAGATAATAAACCACCATTGATTCCTTCAAACTCTAGAATGCCCCTCAGAAGGATAACAAATTTCATCCCTTTCCCATCTCCTAAAAGATCTAAGAGATACACAAATATTCATCAAATGAATGGAAAGGAAAATTCTACCAGAAGAAATTCAATGACAGCAGACAATGAAAGCTTTGCAAGACCAAGAAGCAGGGCATCCATTGCCATGAGACCACCTGTACAATCAACAACGCAGATCATTAAACCAAGGAGGCGAGTTTCCATTGCTACATTCCATCCTGAACCAACATCTGAAATGACTACCGGGGAAAGCAGTGTATCAACAAAGCAGATCCTCAAGCCAAGGAGGCGAGTATCCATTGCTACACTCTGTCCTGATACAACAACTGAACTGACTACTGGGGGAGGCAGTGTATCAACAATGAGGGGGAAAAGGGGTCGGCATTCCAGTTTGTTCGTCCCATTGACTGCGACAACACCAATACAGCCTGTTCGATGCAGCAGTAAGTTTATGGGCAGTCCAGTCCATGCTCAGGCCCCAATACCTGTTAGAGGCAGCAGTAGTAAGTTTACGGGCAGTCCAGTACATGCTCAGGCAGGTTCGCGTCTGGGCAAATTCACGTCTGCATTTGCGCTACAAAGGAAACCTGTACTTTGGAGTCCTCTCGCACTAAAAGCCAAACGAAAAACATCAATATTGTCGTCTCAACTGCAGTAG 2484 0.4199 MNIAVATISFQTLNSRNSSLAKIQKTHCFSFLRKRSYISLLSSFRFIFFFFHKTHGNDRSKRSNSIGFAERFQLFVRDCELKQSPNALPSDNDESNEVNENSDLIDENSISNGIHENSPDLGHTLPILKKILDLSTKVQYLKKEHVALSDHVKFTTESFLGLDAFNSIQLLGSEYELLKKKYLDESSERKRLYNEIIEIKGNIRVFCRCRPLSVSETGNGYTSVVNFESTLDNELQVITQILPRSHLNLIMSLSLKTTKRLFFRKLNLLQHQYWMVLMSVYLLTDKLEPKYQLHVSMLEVYNEKLRDLLVENSAQPKKLEIKQSAEGTQEVPGLVETQVHGTEDVWELLKTGNRVRSVGSTSANEQSSRSHCLLRVTVVGESLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKAAHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSSADLGETLCSLNFATRVRGIESGPARKQLDIGDLFKFKQMAEKAKNDDKEIKKLQESLQSLQIRFSTKEFTCKSLQEKVRDLENQLAEERKTRLKQENRSLASVSAQPPTFFKHKTVTDNKPPLIPSNSRMPLRRITNFIPFPSPKRSKRYTNIHQMNGKENSTRRNSMTADNESFARPRSRASIAMRPPVQSTTQIIKPRRRVSIATFHPEPTSEMTTGESSVSTKQILKPRRRVSIATLCPDTTTELTTGGGSVSTMRGKRGRHSSLFVPLTATTPIQPVRCSSKFMGSPVHAQAPIPVRGSSSKFTGSPVHAQAGSRLGKFTSAFALQRKPVLWSPLALKAKRKTSILSSQLQ 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01914 827 Coils Coil 543 575 - -
Vifa3g01914 827 MobiDBLite consensus disorder prediction 627 650 - -
Vifa3g01914 827 ProSitePatterns Kinesin motor domain signature. 391 402 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vifa3g01914 827 PANTHER KINESIN-LIKE PROTEIN KLP-3 130 239 IPR027640 GO:0003777|GO:0007018
Vifa3g01914 827 PRINTS Kinesin heavy chain signature 361 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa3g01914 827 PRINTS Kinesin heavy chain signature 392 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa3g01914 827 PRINTS Kinesin heavy chain signature 441 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa3g01914 827 MobiDBLite consensus disorder prediction 627 648 - -
Vifa3g01914 827 Pfam Microtubule binding 184 232 IPR031852 GO:0008017
Vifa3g01914 827 ProSiteProfiles Kinesin motor domain profile. 275 491 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa3g01914 827 SMART kinesin_4 200 499 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa3g01914 827 Coils Coil 508 535 - -
Vifa3g01914 827 Gene3D Kinesin motor domain 275 537 IPR036961 -
Vifa3g01914 827 Pfam Kinesin motor domain 273 491 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa3g01914 827 Gene3D Kinesin motor domain 157 247 IPR036961 -
Vifa3g01914 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 531 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01914 Vifa-Chr3 489726771 489730838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01914 291 497 Calmodulin-binding Proteins AT5G65930 47.343 7.46e-46 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01914 K10406 - gmx:100788477 832.402