Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01911 ATGTCAATGGATGTTTTCTCTCTCACTTCAACTACCATTCCCTCTACTCTCACACATACGCATGCTGCACCAGATAAACCTTCCTGTCATCTCCACCTTTCCAAACACTCACATTTCATGAGGTACCCTCTTATCACAACACTCACCAGCAACAGAATCCGCAGTTGCAATAGTATAAGAGCTCAAGCTTCAGGTTCAACAAAATCTAGTACTGCTGAGGGGATTCCTGAGAAAACAGATTCCAAGGATGATAATCTAGTTTTTGTTGCTGGTGCTACTGGAAAAGTTGGTTCAAGAACAGTCAGGGAGCTTATAAAGCTTGGTTTTAAAGTTAGAGCTGGAGTGAGGAATGCTCAGAAAGCTGGTGCATTGGTTCAGAGTGTTAAGCAATTGAAGCTTGATGGTGCAAGTGGAGGGGGTGAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAGCCAAATCAAATTGGATCAGCATTAGGGAATGCATCCACTGTGATATGTACCATTGGTGCTAGTGAGAAGGAAATTTTCGACATTACTGGACCTTGTCGAATCGATTACAAAGCCACCAAAAACCTAGTTGATGCTGCAACCGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCATTGGGAACAAACAAATTTGGTTTTCCTGCAGCTATTCTCAATTTATTTTGGGGAGTTTTGATTTGGAAAAGGAAGGCTGAAGAAGCATTGCTAGCAAGTGGAATTCCGTATACAATAGTGAGACCTGGTGGCATGGAGAGGCCTACTGATGCATACAAGGAAACACATAATGTAACTCTATCAACTGAAGATACTTTATTTGGGGGTCAAGTTTCAAACCTTCAGGTTGCTGAACTCATGGCAACCATGGCCAAGAATCCCGATCTTTCTTATTGTAAAATAGTAGAGGTCATTGCCGAGACAACTGCGCCATTGACACCTGCCGAAAAACTTCTTACCACGATACCTTCTCAACGCCCTTACGTTTCTCCGCCTAAGAAACCAGATACGGCAACTGTCAGTAATCCAGGTCCCCCTGATAATGTTGTAGCAGAAGTACTCAGTATTGCCCCTGAAATAGAAACAGAACAACCAAAACCAGTGGCGAAAACGGAACAGCCACTTTCTCCTTATACTGCTTATGATGATTTAAAGCCACCATCATCTCCTTCTCCAACTAAGCCTAGTGAGAAGAAACAGATAAACATCAGTGATGCAGTTCCAACACCTATTTCTTCGGATACTCCAGGTAGCATTCAAGAAATAGATGGCATTTCTCAGACAACATCTTCCTCAAAAGCGAAGGAGTCTCTATCTCCTTACGCAGCATATCCTGATTTAAAGCCTCCGAGTTCACCATCTCCGAGTGTACCAACTACATCAATATCCAAGATAGATACAGTAGTATCAAGCAATGGAGCAGCTCAACTTTCTGTGGAAGATACACCAAAGGATGATGGACAGCCCCTTCATGAACCAAAGTCAAGACCACTTTCACCTTATGCAATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCATTCAGAAAATCCTAG 1584 0.4255 MSMDVFSLTSTTIPSTLTHTHAAPDKPSCHLHLSKHSHFMRYPLITTLTSNRIRSCNSIRAQASGSTKSSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQLKLDGASGGGEAVEKLEIVECDLEKPNQIGSALGNASTVICTIGASEKEIFDITGPCRIDYKATKNLVDAATVAKVNHFILVTSLGTNKFGFPAAILNLFWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQVAELMATMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTTIPSQRPYVSPPKKPDTATVSNPGPPDNVVAEVLSIAPEIETEQPKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQINISDAVPTPISSDTPGSIQEIDGISQTTSSSKAKESLSPYAAYPDLKPPSSPSPSVPTTSISKIDTVVSSNGAAQLSVEDTPKDDGQPLHEPKSRPLSPYAMYEDLKPPASPSPSFRKS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01911 527 Gene3D - 83 331 - -
Vifa3g01911 527 FunFam Protein TIC 62, chloroplastic 83 332 - -
Vifa3g01911 527 MobiDBLite consensus disorder prediction 464 485 - -
Vifa3g01911 527 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 7 468 IPR044719 -
Vifa3g01911 527 CDD SDR_a5 87 315 - -
Vifa3g01911 527 MobiDBLite consensus disorder prediction 401 444 - -
Vifa3g01911 527 Pfam NAD(P)H-binding 91 301 IPR016040 -
Vifa3g01911 527 MobiDBLite consensus disorder prediction 330 527 - -
Vifa3g01911 527 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 311 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01911 Vifa-Chr3 489439321 489442073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01911 79 215 Monolignol Biosynthesis Gene Families AT5G58490 27.815 4.04e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01911 - - mtr:25492706 800.431