Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01798 ATGGGTAAGGAAAAGGTTCATATTAACATTGTGGTCATTGGCCATGTCGACTCTGGGAAGTCAACTACCACCGGTCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTGATTGAGAAGTTTGAGAAAGAAGCTACTGAGATGAACAAGCCTGATTATGCTGTTCTCATCATTGATTCCACCACTGGTGGTTTTGAGGCTGGTATTTCCAAGGACGGTCAGACCCGTGAACATGCTCTCCTTGCTTTCACTCTTGGTGTCAGGCAAATGATTTGTTGCTGCAACGTGATACCACAACTCAACACTTCAGCTTCAGTTCAATTCTGA 330 0.4455 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIEKFEKEATEMNKPDYAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNVIPQLNTSASVQF 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01798 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 96 IPR027417 -
Vifa3g01798 109 Gene3D - 50 108 IPR027417 -
Vifa3g01798 109 Pfam Elongation factor Tu GTP binding domain 6 45 IPR000795 GO:0003924|GO:0005525
Vifa3g01798 109 Gene3D - 1 49 IPR027417 -
Vifa3g01798 109 PANTHER TRANSLATION FACTOR 4 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01798 Vifa-Chr3 469868712 469869133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01798 1 96 Eukaryotic Initiation Factors Gene Family AT1G07930 55.556 8.77e-46 149