Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01797 ATGGGTAAGGAAAAGGTTCATATTAACATTGTGGTCATTGGCCATGTCGACTCTGGGAAGTCAACTACCACCGGTCACTTGATCTACAAGCTTGGAGGTATTGACAAACGTGTGATTGAGAAGTTTGAGAAAGAAGCTGCTGAGATGAACAAGCCTGATTGTGCTGTTCTCATCATTGATTCCACCACTGGTGGTTTTGAGGCTGGTATTTCCAAGGACCGTCAGACCCGTGAACATGCTCTCCTTGCTTTCACTCTTGGTGTCAGGCAAATGATTTGTTGCTGCAACGCGATACCACAACTCAACACTTCAGCTTCAGTTCAATTCTGA 330 0.4515 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIEKFEKEAAEMNKPDCAVLIIDSTTGGFEAGISKDRQTREHALLAFTLGVRQMICCCNAIPQLNTSASVQF 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01797 109 Gene3D - 1 49 IPR027417 -
Vifa3g01797 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 97 IPR027417 -
Vifa3g01797 109 Gene3D - 50 108 IPR027417 -
Vifa3g01797 109 Pfam Elongation factor Tu GTP binding domain 6 43 IPR000795 GO:0003924|GO:0005525
Vifa3g01797 109 PANTHER TRANSLATION FACTOR 4 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01797 Vifa-Chr3 469858030 469858451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01797 1 98 Eukaryotic Initiation Factors Gene Family AT1G07930 50.968 1.72e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01797 K03231 - cvg:107101090 140.198