Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01764 ATGGAATGTTCCAAAGATTATGCCTTAAGGGCTAAAAGGATGGAAAAGAAGAGGTTCTTACAGGAACATTTTGGTGTTGCAAAACTACTTGCAACGAAGGCTCGGCCCTGCGAGGTTCATGGTGCACAGCCCTTGGATGATGATAAAACTACTCGGAAATGTTACAGGCAGATGGCTCTTACTCTGCATCCGGATAAAAACAAGTCGGTGGGTGCAAATGGCACATTTAAGCTGGTTTCTCAGGCATGGACTGTATTATCTGATAAAGCTAAGAGAGCCGCCTTTGATCAAAAGTGCCGCTTATGGGAGTCCTTCAAAAGGATTATTGGTGGTATACGTATACCTTGGAATAGTTTGTTTGATACTGCTAACCTTGGTGGGAAATCTTCTGAACCTGCTACTCAGGGTGGTTTGTTTAAGCTGCTAACCGGAAGGACAGATCTCGCGAGTGGCGCTCATACCAATCCTACTCCAAGACCTTCTGTACCTACTAGTTATAATGGTTTGTTTAATTCTCCTATCGGGAAGGACATAGATCATATGAGTGCAATTTCTGCAGGACACACTATGAGTACTTTGCTGTTTATAGAAACTGCAATATTGTTTGTGCCGGCTGCAACAAGCCATTTTTTGCTTCTGAGAAACCAGCCTCGCCTTTAA 660 0.4348 MECSKDYALRAKRMEKKRFLQEHFGVAKLLATKARPCEVHGAQPLDDDKTTRKCYRQMALTLHPDKNKSVGANGTFKLVSQAWTVLSDKAKRAAFDQKCRLWESFKRIIGGIRIPWNSLFDTANLGGKSSEPATQGGLFKLLTGRTDLASGAHTNPTPRPSVPTSYNGLFNSPIGKDIDHMSAISAGHTMSTLLFIETAILFVPAATSHFLLLRNQPRL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01764 219 SMART dnaj_3 34 91 IPR001623 -
Vifa3g01764 219 SUPERFAMILY Chaperone J-domain 45 114 IPR036869 -
Vifa3g01764 219 Gene3D DnaJ domain 34 100 IPR036869 -
Vifa3g01764 219 PRINTS DnaJ domain signature 71 91 IPR001623 -
Vifa3g01764 219 PRINTS DnaJ domain signature 55 70 IPR001623 -
Vifa3g01764 219 Pfam DnaJ domain 46 96 IPR001623 -
Vifa3g01764 219 CDD DnaJ 47 88 IPR001623 -
Vifa3g01764 219 ProSiteProfiles dnaJ domain profile. 35 99 IPR001623 -
Vifa3g01764 219 PANTHER BNAC03G44070D PROTEIN 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01764 Vifa-Chr3 462376448 462377107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01764 47 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.636 3.86e-08 50.8