Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01755 ATGGTTGGTGGTATAGCAGGGTTATGGGGAGCATTTATAGAAGGTCCAAGAATCGGCCGGTTCCATCGAACCGGTCGCTCTGTTGCTTTAAAAGGACACAGCGCGTCTTTGGTAGTGTTAGGTTCGTTTTTATTATGGTTTGGTTGGTATGGGTTTAACCCCGGTTCGTTTTTAACCATTGTAAAAAACTACGGGAATAACGGAAGGGATTATTATGGTCAATGGAGTGCTATTGGAAGGACGGGTGTCACAACGACATTGGCTGGTTGCACTGCGGCTTTAACGACTCTGTTTAGTAAACGGTTATTAGATGGACACTGGAACGTGATTGACGTGTGTAACGGTTTACTCGGCGGTTTCGCCGCGATAACCTCGGGTTGTTCGGTTGTTGAACCGTGGGCGGCGATTGTGTGTGGGTTTGTTGCGGCGTGGGTTTTGATCGGGCTTAATAAATTGGCGGTTAAGGTGAAGTATGATGATCCTTTGGAGGCGGCACAGTTGCATGGAGGGTGTGGCGCGTGGGGAGTGTTGTTTACAGGGTTGTTTGCAAAGAGGGAGTATGTTGAGGAGATTTATGGGATTGGGAGGCCGTGTGGGTTGTTAATGGGTGGTGGAGGGAGATTGTTTGCGGCGCAGGTGGTTGAGGTGGTGGTGGTGTGTGGGTGGGTTACGGTGACGATGGCGCCGTTGTTTTATGGATTGAATAAGTTGAAGTTGTTGAGGGTGTCGAGAGATGAGGAGAGTGCGGGGATGGATTTGAGTAGACATGGTGGATTTGCTTATGCGTATCATGATGAGGGGGATGATGAGTCGGTTAGGACATTAGGGTTTATGATGGGTAGAATTGAGCCTGCCGGTAGTGTTTCTCCCTCCGCCGGCGAAATGACAAACACCGCACCATCGATGTGA 909 0.495 MVGGIAGLWGAFIEGPRIGRFHRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKNYGNNGRDYYGQWSAIGRTGVTTTLAGCTAALTTLFSKRLLDGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGLNKLAVKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKREYVEEIYGIGRPCGLLMGGGGRLFAAQVVEVVVVCGWVTVTMAPLFYGLNKLKLLRVSRDEESAGMDLSRHGGFAYAYHDEGDDESVRTLGFMMGRIEPAGSVSPSAGEMTNTAPSM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01755 302 Gene3D Ammonium transporter AmtB like domains 1 278 IPR029020 -
Vifa3g01755 302 PANTHER AMMONIUM TRANSPORTER 1 257 - -
Vifa3g01755 302 Pfam Ammonium Transporter Family 1 261 IPR024041 GO:0008519|GO:0016020|GO:0072488
Vifa3g01755 302 SUPERFAMILY Ammonium transporter 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01755 Vifa-Chr3 460680431 460681339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01755 1 296 Inorganic Solute Cotransporters AT1G64780 75.000 1.94e-162 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01755 K03320 K07573 gmx:100797209 480.33