Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01645 ATGGCCAAGAAGAACAAGAGCTGGTTTAATCTGGTGAAGAGCCTTTTCATATGGGACACACATTCCACACAAGAGAAGAAAGAGAAAAGAAGGAAATGGATATTTGGAAAGCTAAAAACCAAGAAGTTACCTTCAATTACAGCTCCAGCAACAACATCAAATGAAGCTGAGGAGGAGGGAAAAACCAAGCATTCTCAAGTTGTTATGCTTAATGAAGTTTCACAATCTGGTTATCAAAAAGATCAAGATGGCTCAGAAGAATCTGAACCTGTTGAAACTAGGAATGGTGTTCCTCGATCAATATATCTTTGCCAGAGAGAGATTCAAGAATTTGCAGCCATCAAAATTCAAACTGCTTTTAGGGGCTACCTTGCAAAGAAGGCTTTGAGGGCATTGAAAGGAATAGTAAAACTTCAAGCGATTATTCGTGGGCGAGCAGTGAGACGCCAAGCTATGAGTAATCTCAAGAGCTTGCAGTCCATTGTAAGTATTCAATCAAAGATATGTGCAAGGAGACTCCAAATGGTTGAAGGAAGATGGGATTCTGTTGAAGATGAAGAGACTCTTTATTCTAAAGACAAGATCATTAGGATGGACTCAAACAGCGAAAGAAAGTGGGATGACAACACTTTATTGAAGGAAGAGGTAGATGCCTGTTGCATGATCAAGAAAGAAGGCATTATTAAGAGAGAAAGAATAAAAGAATACACATTTAATCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTGAACGGAAGATGGAGGTACTGGCTAGAGCAATGGGTAGATACACAGCTTTCTAAAAGCAAAGAACTTGAAGGAGGGTATGAATGGATTTGGATGTGGCATAAAAGTTGCATACTAAAAGATCACGATGTTTTTGATACTTGGCCTTGA 900 0.39 MAKKNKSWFNLVKSLFIWDTHSTQEKKEKRRKWIFGKLKTKKLPSITAPATTSNEAEEEGKTKHSQVVMLNEVSQSGYQKDQDGSEESEPVETRNGVPRSIYLCQREIQEFAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSNLKSLQSIVSIQSKICARRLQMVEGRWDSVEDEETLYSKDKIIRMDSNSERKWDDNTLLKEEVDACCMIKKEGIIKRERIKEYTFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEGGYEWIWMWHKSCILKDHDVFDTWP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01645 299 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Vifa3g01645 299 Gene3D - 109 160 - -
Vifa3g01645 299 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Vifa3g01645 299 PANTHER IQ-DOMAIN 5-RELATED 1 265 - -
Vifa3g01645 299 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Vifa3g01645 299 MobiDBLite consensus disorder prediction 45 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01645 Vifa-Chr3 425055862 425057359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01645 1 274 IQD Protein Family AT5G13460 51.786 4.92e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01645 - - gmx:100800192 384.8