Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01556 ATGGCTAATAAGGAGCAGTTGAAGGTTCTTAATGCACTGGATGTGGCAAAAACACAAATGTACCATTTCACTGCTATTGTGATTGCTGGAATGGGTTTCTTTACTGATTCCTATGATCTCTTCTGCATTTCACTCGTCACCAAATTGCTCGGGCGTATCTATTACTATGATGGTGGCAACAGTCCAGGTTCTCTGCCTCAAAATGTTTCTGCTGCAATCAATGGTGTTGCCTTCTGTGGAACACTTGCAGGACAACTTTTCTTTGGTTGGCTTGGTGACAAAATGGGAAGGAAACGTGTTTATGGAATGACCCTTATGCTTATGGTCATAGCTTCACTTGCTTCTGGCCTCTCTCTTGGGAAGGATCCCAAAGCTGTTGTGTCCACTCTTTGTTTCTTTAGGTTTTGGCTTGGATTTGGAATTGGTGGTGACTACCCTCTTTCAGCTACAATCATGTCTGAGTATGCAAACAAAAAGACCCGAGGCGCATTTATAGCGGCTGTTTTTGCTATGCAAGGTTTTGGAATTTTGGCTGGAGGAGCTGTTGGAATTATAGTTTCGTCTGCTTTTAAAGCCTTTTTCCCTGCTCCAGCTTTTCATGATAACCCAATTCTGTCCACAGTTCCACAAGCTGATTATGTTTGGAGGATAGTCTTGATGTTCGGTGCAATTCCTGCAGCGTTGACATACTATTGGAGGATGAAAATGCCTGAAACTGCAAGATACACCGCTCTGGTTGCAAAGAATGCTCAGCAAGCTGCTGCAGATATGTCAAAAGTTATGCAAGTTGTGATAGAAACTGAAGTGGATCAAAATCAAAGACAAGGAGGGAACGAGTTTGGTTTGTTTACAGAAAGCTTTGTTCGCCGTCATGGACTACATTTGTTTGCAACTGCTATTACTTGGTTCTTGTTGGATATTGCTTATTATAGTCAGAATCTTTTCCAGAAAGATGTTTTTAGTGCAATTGGATGGATACCAGAAGCTAAAACAATGAGTGCCCTTGAAGAGGTTTATAAGATTGCTAGAGCACAGACACTTATAGCTCTTTGCAGCACTGTTCCTGGTTACTGGTTCACAGTTGCATTCATTGATAGAATTGGAAGATTTACAATCCAATTGATGGGATTTTTCTTCATGACTGTGTTCATGTTTGCATTGGCCATTCCTTACCATCACTGGACTTTGAGTGGAAACCAAATTGGATTTGTTGTCATGTATTCTTTGACATTCTTCTTTGCTAATTTTGGCCCAAACGCAACGACTTTTGTGGTTCCAGCTGAGATTTTCCCGGCAAGGCTAAGGTCAACATGTCATGGAATATCAGCCGCTGCTGGAAAAGTTGGGGCAATGGTAGGTGCTTTTGGTTTCTTGTATGCTCAAAATAGCATTGGATTGAGAATGGTGCTTCTGCTTTTGGGTGGGGCTAACTTCTTGGGAATGTTGTTTACATTGTTGGTGCCTGAATCTAAAGGAAAGTCTTTGGAAGAGATTTCTGGTGAAGCTGATGAAGAAGCTAATATTAATAGAGTTTAG 1536 0.4141 MANKEQLKVLNALDVAKTQMYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYYDGGNSPGSLPQNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASLASGLSLGKDPKAVVSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGAVGIIVSSAFKAFFPAPAFHDNPILSTVPQADYVWRIVLMFGAIPAALTYYWRMKMPETARYTALVAKNAQQAAADMSKVMQVVIETEVDQNQRQGGNEFGLFTESFVRRHGLHLFATAITWFLLDIAYYSQNLFQKDVFSAIGWIPEAKTMSALEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTLSGNQIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKVGAMVGAFGFLYAQNSIGLRMVLLLLGGANFLGMLFTLLVPESKGKSLEEISGEADEEANINRV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01556 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 25 492 IPR020846 GO:0022857
Vifa3g01556 511 Gene3D MFS general substrate transporter like domains 21 510 IPR036259 -
Vifa3g01556 511 CDD MFS_PhT 26 491 - -
Vifa3g01556 511 SUPERFAMILY MFS general substrate transporter 13 499 IPR036259 -
Vifa3g01556 511 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 23 495 - -
Vifa3g01556 511 Pfam Sugar (and other) transporter 26 499 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa3g01556 511 NCBIfam phosphate:H+ symporter 12 501 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vifa3g01556 511 FunFam Inorganic phosphate transporter 1-6 21 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01556 Vifa-Chr3 406999412 407000947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01556 4 500 Inorganic Solute Cotransporters AT2G38940 76.070 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01556 K08176 - gmx:100802365 863.603