Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01554 ATGTTTGGTGCTGTTCCAGCAGCTCTTACCTATTACTGGCGTATGAAGATGCCCGAGACGGCTCGTTACACAGCACTTGTTGCTAAGAACGCGAAACAAGCCGCTTCTGATATGTCGAAGGTCTTACAAGTTGAACTTCAAGCTGAAGAGGAGAAAGTGCAGCAGATAGATGCGAACCAAAGCCAAAAGTTTGGCCTATTTAGCAAGCAATTCGCCAAGCGCCACGGAATGCACTTGTTGGGAACAACGACTACTTGGTTTTTGTTGGACATTGCTTTCTATAGTCAGAATCTTTTCCAAAAAGACATTTTCACTGCTATTGGATGGATCCCTCCTGCGAAAGAAATGAATGCAATTCATGAACTTTATAGGATAGCAAGAGCACAAACACTGATAGCAATGTGCAGTACAGTTCCAGGTTACTGGTTCACAGTCGCGTTTATCGATTACATGGGCCGATTCGCGATCCAGCTGATGGGCTTCTTCTTCATGACAGTTTTCATGTTTGCTTTAGCTATACCTTATGATCACTGGAAACAAAAAGAAAACAGAATCGGGTTTGTCGTGATGTACTCATTAACTTTCTTCTTCGCCAATTTCGGTCCAAACGCGACCACATTTGTTGTCCCGGCCGAGATTTTCCCTGCAAGACTAAGATCAACCTGTCACGGTATCTCGGCCGCTGCAGGAAAAGCTGGAGCAATTGTTGGCGCATTCGGATTCTTATACGCCGCACAAAGTAAGAAAGCGTCCGAGACCGATACCGGTTACCCAACCGGAATCGGGATTAAGAACTCCCTCATTATGCTTGGTGTTGTTAACTTCTTTGGAATGGTATTCACCTTCTTAGTTCCGGAACCAAATGGAAAATCACTGGAAGAAATGAGTGGTGAGAATGAAGAAGATGGTGCTGAGGCTATTGAGATGGCAGGGCCAGGAACTGCTAGGACAGTACCTGTTTAA 963 0.4496 MFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELQAEEEKVQQIDANQSQKFGLFSKQFAKRHGMHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHELYRIARAQTLIAMCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWKQKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKKASETDTGYPTGIGIKNSLIMLGVVNFFGMVFTFLVPEPNGKSLEEMSGENEEDGAEAIEMAGPGTARTVPV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01554 320 Pfam Sugar (and other) transporter 3 296 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa3g01554 320 FunFam Inorganic phosphate transporter 58 310 - -
Vifa3g01554 320 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 289 IPR020846 GO:0022857
Vifa3g01554 320 Coils Coil 39 59 - -
Vifa3g01554 320 SUPERFAMILY MFS general substrate transporter 2 296 IPR036259 -
Vifa3g01554 320 Gene3D MFS general substrate transporter like domains 52 311 IPR036259 -
Vifa3g01554 320 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01554 Vifa-Chr3 405864544 405865506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01554 1 302 Inorganic Solute Cotransporters AT5G43360 79.470 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01554 K08176 - gmx:100780201 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01554 3 405864544 405865506 Vifa3g01554 3 405864544 405865506 ECH