Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01553 ATGGCAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCCAAGACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGATTACACCAAAGCGAAGCCCGGTGTTCTTCCTCCCGGTGTTCAAGCCGGAGTAACCGGTGTCGCGCTAGTTGGCACTTTAGCAGGCCAACTATTCTTCGGTTGGCTTGGTGACAAATTGGGAAGAAAGAAAGTTTATGGAATGACCCTTATGCTTATGGTTTTGGCTTGGTTTTGGAATTGGTGGGATTCGGAATCATGGCTGGTGGAATATTTGGCTTGA 309 0.4693 MAGQLGVLNALDVAKTQMYHFTAIVIAGMDYTKAKPGVLPPGVQAGVTGVALVGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVLAWFWNWWDSESWLVEYLA 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01553 102 SUPERFAMILY MFS general substrate transporter 40 91 IPR036259 -
Vifa3g01553 102 Pfam Sugar (and other) transporter 9 92 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa3g01553 102 Gene3D MFS general substrate transporter like domains 5 100 IPR036259 -
Vifa3g01553 102 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 102 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01553 Vifa-Chr3 405863890 405864439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01553 4 85 Inorganic Solute Cotransporters AT5G43360 61.682 1.36e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01553 K08176 - gmx:100792177 132.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01553 3 405863890 405864439 Vifa3g01553 3 405863890 405864439 ECH