Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01546 ATGAAACTATCTTCTTCATCTTCTCATCAACAAAACCAAGATGATAAAAGTAAACTTTCTAAGAAAATGAAGATATCAAACTCAATCAAACTCTCTCATCTTGAGACTCTTCAACTTCAATCAACACCAATTTCAACAAAAACAACAACAACAAAAGATGGTTCACCAAATTACATGAAGCACACAAGTAGTTCACAATCAAAAAAGGAACTTTTTCATGTAAGTCTTAGAAAAACTCAATCTTGCTCTGTTTCTAAGAATCTTGATACAAAATTTTCTAGTGATTATTCATGTAAAAAACCTAGTTTGAGTTTGGTTAGAACATTAACAAAAACTACTAGTTTTAAGGGTTCTAGAAATTCTCCTAGAAAATCAACAAGGGCTACTTGTTCTTCCACTCTGAAAGACTCAAACTTTCCATCATATCTTGAGCTTAATCATGGTGGAACTGAGTTAGAGGGAAGTTAG 468 0.3184 MKLSSSSSHQQNQDDKSKLSKKMKISNSIKLSHLETLQLQSTPISTKTTTTKDGSPNYMKHTSSSQSKKELFHVSLRKTQSCSVSKNLDTKFSSDYSCKKPSLSLVRTLTKTTSFKGSRNSPRKSTRATCSSTLKDSNFPSYLELNHGGTELEGS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01546 155 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 4 154 IPR044681 GO:0005516
Vifa3g01546 155 MobiDBLite consensus disorder prediction 1 25 - -
Vifa3g01546 155 MobiDBLite consensus disorder prediction 112 132 - -
Vifa3g01546 155 MobiDBLite consensus disorder prediction 40 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01546 Vifa-Chr3 401659606 401660073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01546 54 150 Calmodulin-binding Proteins AT2G38800 48.039 1.23e-15 71.2