Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01491 ATGCACCATGGTGCCGCTTCTGTCAGACCGTTGCAACTGAGGACCTGTACAAGTGATCACAACAGTATAAAATCAATTTGCAGCAGTACAATAGTTCGTATTTGCTCAACTGGAGAGGTAGGTTTGTCCAACAGTTATCGGACTCCATACTATCGGACTCCGTCTTCTAACAAACAAAGGGTTGTAGAGGAGTCTGAGTCAGAGTTGGAAGACGATCGACAAAGATATGCAGGACTAGAAGTAACAAAATCAGGGGCTACCAGAATTTATGATGTTGTATGCATATCACCAAGGAATCACATGGTTTTCACTCCTTTATTGGCTTTGACATGTGTTGTTACACTTGAATTCAGGTCTATTGCCGAGCCTATTGGTAATATACAAGATGCACTTTCAAAGGATCCCAATTAA 411 0.4161 MHHGAASVRPLQLRTCTSDHNSIKSICSSTIVRICSTGEVGLSNSYRTPYYRTPSSNKQRVVEESESELEDDRQRYAGLEVTKSGATRIYDVVCISPRNHMVFTPLLALTCVVTLEFRSIAEPIGNIQDALSKDPN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01491 136 Gene3D - 75 134 - -
Vifa3g01491 136 Coils Coil 62 82 - -
Vifa3g01491 136 PANTHER NADH DEHYDROGENASE 76 131 IPR045024 GO:0003954|GO:0006116
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01491 Vifa-Chr3 388203686 388205369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01491 76 127 Chloroplast and Mitochondria Gene Families AT4G21490 46.154 1.56e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01491 K03885 - gmx:100814927 116.316