Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01474 ATGGGGAAGTACATGAAGAAACCGAAACCTAAATCGGAATTACCTTTACTTGATTCCACCACCACCACTATCACCACCACCACCACCTCCACCACCTATTACGGTGTTCGAACTCGTGCTAAAACCCTAGCTCTTTCTCAGAATCAGGATCTCTCTCTTTCTAATGATTCCTACCTTCAGCTTCGGAGTCGTCGCCTCCAGAAACCTCCGACTCCTCAACATTCTACTAAGAAGAATAAGCCCCAAAATCAAAACCCTAAATCCCCAATTCCTACCAAGGGGAAAACTCCTGAAGCTGAAGACCCTGACTTTGGGGAAAATGTTTTGGATTTTGAAGGTAGAGAGAGAAGCACTCGGGAAACTACACCTGTCAATTTGATAAGGAACCCGGACGTTCTCAGGACTCCTAGTTCGACTACCAAGCGTACTTTTTCAACTGACACTCATCGCAGAACGGAGCGTGCAACTAGAACTGTCATCCCATCTACACGGGAAATGGATGAATTCTTTGCTAAAAATGAAGCGGCTCAGCAAAAGAAGTTCATGGAGAAGTACAACTTTGATCCTGTGACAGAGATGCCACTCCCAGGGCGTTACGAATGGGAAAAATTAACACCCTAG 621 0.4557 MGKYMKKPKPKSELPLLDSTTTTITTTTTSTTYYGVRTRAKTLALSQNQDLSLSNDSYLQLRSRRLQKPPTPQHSTKKNKPQNQNPKSPIPTKGKTPEAEDPDFGENVLDFEGRERSTRETTPVNLIRNPDVLRTPSSTTKRTFSTDTHRRTERATRTVIPSTREMDEFFAKNEAAQQKKFMEKYNFDPVTEMPLPGRYEWEKLTP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01474 206 Gene3D p27 137 206 IPR044898 -
Vifa3g01474 206 MobiDBLite consensus disorder prediction 94 121 - -
Vifa3g01474 206 MobiDBLite consensus disorder prediction 67 91 - -
Vifa3g01474 206 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 205 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vifa3g01474 206 PIRSF CKI_KRP_plant 1 206 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vifa3g01474 206 Pfam Cyclin-dependent kinase inhibitor 160 204 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vifa3g01474 206 MobiDBLite consensus disorder prediction 67 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01474 Vifa-Chr3 385852653 385854407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01474 1 206 Core Cell Cycle Gene Families AT5G48820 38.554 1.02e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01474 - - gmx:100781000 233.417