Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01385 ATGACCAAGACGGCAAGTATAGAGATGGTAACTGATGAGAATCTGGAAAAACATATTCACAAACACATGGGGTGCATGGCTGGTTTCCTTCAAATCTTCGACCGGAATCATATTCTCTCTGGAAAACGCATCTACTCCACCAAAAGACTCCCGCCGCCATCACCGGAAACACCACGGAAAGACGATGGCTCACCGGCGCTATCAGCAACACCGTCTCCGGTTAAAGAGGTCCAATGTTTAGCAAAACCAGTCCTCCCAGTTCTGGAACTCAAAGAAGGTACAAGATCTTCATGGAAATTCTCAAGAGAGGCTCCGAGACTCTCTCTCGATAGCAGAGCAGTGGTTGACGCCAAAGGAGCCCTTCACCCGAGAGAGATCCGAACAAACACAACGGTAAACCCGGAAAACGACGGTGACAAACAGCGTCGTTCCACCAGCAGCGTAATTGTCAGGCTCATGGGTCTTGACTCGTTACCAACGGACTCCGTTGCAAAGCTGCAAAGATCTGCGTCGGAGTCCAGAGTTTCCAGAGATCGGTCCAACAATTACACTCAACGCAGTAATGCCGGCTCGGGCTTGAACCAGATGAATAATCATAATCATAATCATAATAAAACTAATTCTAATGTTGTTAATGTTCATGCTACTAGAAATGCTAATGTTATTAATTCTTATTCTTACGGTACAATCGAAGATAGTCGATTGTGGAACGGTAGAGTTGTTGCAGAGGGAGGTAGAGGGAAACATAATCAAAATAAGGTAACAGTAATGGTACAAAAGAAGAGTTTCTACGACTCTACAGATTTCTTCCCTGAACCGAAGCACAATGTTTCGATCTCCGAAGAGATAGAGAAAAGGTTGAAGATGCGTGGGATTAACCAACCTTCTCAAGATCTCGACACTCTGAAACATATCTTAGAAGCTATGCAGCTCAAAGGCCTTCTTCGTTCCTACAAGTCAAACCAATCTCCCATTGTGTTAATGCAGCCTCCCAGATCTTCTCGGTTCGAGCGGTTTGAACGGTTCAATCGGTTCGGTTATGATTCTCCACCTCCGCATTCTTCAGTTCGGTCTAATTCTCCAGCTCGCCGGAACTTAAGTCCTAGACTTTTCGGCGAGTATGACCGGGCTCAAGTTTGTTCGAGAAACTCGAGCCCGAGCCGGAGGAATGCGAATGTCCCGAATATGGAGACGCGGAGGAGAGTTAGTAACAACGAGGGTGTTGATTCTAGAAGAGTGTCTCCTGTTCATTCGCCTAAGATAAGTTCCAGAAGAAATGCAACGGCTCCGATAGTGACAGGTGGATCTCCGAGGATGAAAAAAGTGATTGATCCTAAGGTGAAAATGTTGGGTGTAGCAGAGGATGAATGGTCTAATGTTTCAGATAACAGTTTCACCACTTCCAATTCTCATACCGATTCAGAGAGGTATAAATTGGAAGAGTACAAAGAAGGGAGGAATCTGCTTGATAGATGCGACAAATTGCTGAACAGCATAGCGGAGATAACCGCATCTAACGAGTTACAACCGAGTCCAGTATCAGTTCTTGACCCGTCTGTTTACAAGGACGAGTGGTGTTCACCTTCACCAATTACCAAAAGAAACATTGATTACACTTTCAAAGATCAAGTGGCGGAATTTGAAGATGAAATGTGGAGTGCAGAGGAGGGAAAATCCGAGGAGGAAGCGAAATCAGAGGATTGTGATTTCGTTTATTTTTCTAAGATTCTGCGTGCTTGTAGTTATTATCCAGAAGATTGCGACATTTTTGTTTTACTTGAGAAGCAACAATTTCTGAAGGGGAAGGATACTTCAAAGACTTCTACATTACAGAGACGGTTAATTTTTGACACGCTGCAGGAAATAATTAACCGGAACCAAAGACTACCGCCGTGGAAGGCGGTGTCTCAAGGAGAGGAAACACAAAAGATCTGGTTGGAGTTTCTGAGGATACGAGATAGGGAGGAATCGGATTCGGAGGACTTGTTTAGAGTGATATGTGATGTGTTAAAGAAGGATATGGCAGAGGAGGTGAGTGGTTGGGGTGAATGGACGGTGGAGATGGGAGAGTTGGTTTTGGGCGTCGAACGGATGGTATTCAAAGATCTAATTGACGAAACTATACAACATCTTGCTTCATTTGCACCACAATGTAACAAACTAGGGGCGCTTCGTAGACAACTTGTATTTTGA 2193 0.4455 MTKTASIEMVTDENLEKHIHKHMGCMAGFLQIFDRNHILSGKRIYSTKRLPPPSPETPRKDDGSPALSATPSPVKEVQCLAKPVLPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTTVNPENDGDKQRRSTSSVIVRLMGLDSLPTDSVAKLQRSASESRVSRDRSNNYTQRSNAGSGLNQMNNHNHNHNKTNSNVVNVHATRNANVINSYSYGTIEDSRLWNGRVVAEGGRGKHNQNKVTVMVQKKSFYDSTDFFPEPKHNVSISEEIEKRLKMRGINQPSQDLDTLKHILEAMQLKGLLRSYKSNQSPIVLMQPPRSSRFERFERFNRFGYDSPPPHSSVRSNSPARRNLSPRLFGEYDRAQVCSRNSSPSRRNANVPNMETRRRVSNNEGVDSRRVSPVHSPKISSRRNATAPIVTGGSPRMKKVIDPKVKMLGVAEDEWSNVSDNSFTTSNSHTDSERYKLEEYKEGRNLLDRCDKLLNSIAEITASNELQPSPVSVLDPSVYKDEWCSPSPITKRNIDYTFKDQVAEFEDEMWSAEEGKSEEEAKSEDCDFVYFSKILRACSYYPEDCDIFVLLEKQQFLKGKDTSKTSTLQRRLIFDTLQEIINRNQRLPPWKAVSQGEETQKIWLEFLRIRDREESDSEDLFRVICDVLKKDMAEEVSGWGEWTVEMGELVLGVERMVFKDLIDETIQHLASFAPQCNKLGALRRQLVF 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01385 730 MobiDBLite consensus disorder prediction 126 145 - -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 344 366 - -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 378 437 - -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 44 73 - -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 161 206 - -
Vifa3g01385 730 Pfam Domain of unknown function (DUF4378) 579 706 IPR025486 -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 408 430 - -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 378 401 - -
Vifa3g01385 730 MobiDBLite consensus disorder prediction 162 206 - -
Vifa3g01385 730 PANTHER LONGIFOLIA PROTEIN 11 60 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01385 Vifa-Chr3 358508150 358510728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01385 417 730 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 41.745 1.16e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01385 - - psat:127095672 1275.38