Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01351 ATGGAACTCGAAACGTTGGTTTCATGGTTTCTTCTCTTTGCAACTCTCCTTTGGTTCTTACTCTTATCCACAAAAACACAATCCAAATCCCTAAAACCACCCTCCTCTACCACTAACACCACCATTCCTAAATCCTACCCCATCTTCGGCTCTGCCTTTTCCGTTGCAGCCAATTTCCACCGCCGCGTGCAATGGATCTCCGACATCCTTCAAACCACCCCTTCCTCAACCTTCATCCTCCACCGCACCTTCGGCTCCCGCCAAGTCTTCACAGCAAACCCCTTGGTAGTCCAACATATTCTCAAAACCAACTTCCCTTGCTACCGCAAAGGTCTCACACTTAACCGTTCCCTGGGTGATTTCCTCGGTAACGGTATCTTCAACGCCGACGGTGAAACCTGGAAGTTCCAACGACAAATCTCCAGCCATGAATTCAACGCTAAATCTCTTCGGAAATTCGTTAAAACAGTAGTTGACGTAGAACTCTCCGATCGTCTAGCTCCTATTCTCTCTGAAGCTTCAAAGAATCAAACCATCCTTCCTGATTTTCAAGATATCCTTCAGCGTTTTACATTCGATAACATATGTGTAATCGCGTTTGGATTCGATCCAGAGTATCTCCTCCCTTCTCTTCCCGAAACGGCGTTTGCAAAAGCCTTTGACAATGGCACCCGAATAAGCAGCTTGAGATTCAACGCGGCGGTTCCATTGATATGGAAAGTGAAGAAAATCCTAAACATCGGCTCTGAACGACGGCTGAAAGAAGCAGTTGCAGAAGTAAGAGGACTCGCCACAAAAATTGTTAGGGATAAGAAAAAAGAGCTTAAAGAAAAATCAACATTGGAATCATTGGATATTTTATCGCGTTTTTTAAGTTCGGGTCATTCAGATGAATCATTTGTTATTGATATTGTAATAAGCTTTATTCTTGCTGGGAGAGATACAACTTCAGCGGCACTCACATGGTTCTTTTGGCTACTCTCTAAACATAGTCACGTTGAGAATGAGATTCTCAAAGAGATAACTGCAAAATCGGAATCAGTTAGTTATGATGAAGTGAAGGACATGGTTTATACTCACGCGGCGCTGTGCGAGAGTATGAGGCTGTATCCTCCTGTTCCGGTGGATACTAAAGAAGCGGCTTACGACGATGTTTTACCAGACGGTACTTTAGCGAAGAAAGGGTGGAGAGTGGCGTATCATATATATGCTATGGGAAGGTCTGAGAAAATATGGGGACCTGATTGGGCCGAGTTTCGACCCGAGAGGTGGTTGAGTCGGGATGAAGATGAGATGTGGAGCTTTGTTGGGATGGATCCTTATAGTTATCCGGTTTTTCAGGCTGGGCCAAGGGTGTGTTTAGGGAAAGAAATGGCGTTCTTACAAATGAAGAGGGTGGTTGCCGGAGTTCTGAGGGAGTTTAGGGTGGTTCCGGCGATGGAAAAAGGGGTTGAGCCGGAGTACACTGCACACCTTACGGCTTTAATGAAAGGTGGTTTCCCTGTCAGGATTGAAAAGCGTAGTCACATTATAGACCAATAA 1542 0.4514 MELETLVSWFLLFATLLWFLLLSTKTQSKSLKPPSSTTNTTIPKSYPIFGSAFSVAANFHRRVQWISDILQTTPSSTFILHRTFGSRQVFTANPLVVQHILKTNFPCYRKGLTLNRSLGDFLGNGIFNADGETWKFQRQISSHEFNAKSLRKFVKTVVDVELSDRLAPILSEASKNQTILPDFQDILQRFTFDNICVIAFGFDPEYLLPSLPETAFAKAFDNGTRISSLRFNAAVPLIWKVKKILNIGSERRLKEAVAEVRGLATKIVRDKKKELKEKSTLESLDILSRFLSSGHSDESFVIDIVISFILAGRDTTSAALTWFFWLLSKHSHVENEILKEITAKSESVSYDEVKDMVYTHAALCESMRLYPPVPVDTKEAAYDDVLPDGTLAKKGWRVAYHIYAMGRSEKIWGPDWAEFRPERWLSRDEDEMWSFVGMDPYSYPVFQAGPRVCLGKEMAFLQMKRVVAGVLREFRVVPAMEKGVEPEYTAHLTALMKGGFPVRIEKRSHIIDQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01351 513 CDD CYP86A 77 500 - -
Vifa3g01351 513 PANTHER CYTOCHROME P450 26 502 - -
Vifa3g01351 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 Pfam Cytochrome P450 43 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 Gene3D Cytochrome P450 32 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01351 513 SUPERFAMILY Cytochrome P450 43 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01351 Vifa-Chr3 346660726 346662267 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01351 10 513 Cytochrome P450 AT3G48520 45.866 5.44e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01351 K20769 K20768 ag:AAG33645 813.913