Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01348 ATGGAACTCCAAACATTGATTTCGTGGTTACTTTTCTCTGCAAGTTTCATTGGGTTCTTATTCTTAGCCAGAAAAACACCTTCCTCTACCACCAACAACACACTACCCAAATCTTACCCCATTTTCGGTTCTGCTTTTTCTCTGCTAGCCAACTTCCACCGACGCATACAATGGACCTCCGACATTCTCCAAACCATCCCTTCCTCCACCTTCATCCTACACCGCCCTTTCGGTTCCCGCCAAGTCTTCACGGCTCAACCCGCCGTGGTGCAACACATTCTCAAAACCAATTTCCCTTGCTACGGCAAAGGTCTCACGTTTTACCAATCTATCAATGATTTTCTCGGCGACGGAATCTTCACTGTCGACGGTGAAGCTTGGAAGTTCCAACGACAAATCTCCAGCCACGAATTCAACACTAAATCCCTCCGGAAATTCGTTGAAACGGTAGTAGATGTTGAACTCTCCGATCGCCTCCTACCTGTTCTCTCCGAAGCTTCTAAAAATCAAACCACTATTCTTGATTTCCAAGACATCCTCCAACGTTTCACCTTTGACAACATTTGCATGATCGCGTTTGGATACGATCCAGAGTATCTCATCCCTTCCCTTCCTGAAATATCATTTGCAAAAGCCTTCGAAGAAAGCTCAAAACTCAGTATCGAGAGGTTAAATGGGGTGATTCCGTTACTATGGAAAGTGAAAAGATTCCTGAACATAGGAGTGGAGCGACAGCTGAAAGAAGCAGTTGCAGAAGTAAGAGGACTCGCCACTAAAATCGTTAAGAATAAGAAAAAAGAGCTTAAAGAAAAAGCAGTAAAGTCGGAATCTGTTGATCTTTTATGGCGATTTTTAAGTTCTGGACATTCAGATGAATCTTTTGTTATTGATATGGTAATAAGTTTTATTCTTGCTGGAAGAGATACAACTTCAGCTGCACTCACGTGGTTCTTTTGGTTACTCTCTAAGCATAGTCATGTCGAGAATGAGATTCTCAAAGAGATTACCGGAAAATCGGAAACTGTTGGCTACGATGAGGTGAAGGATATGGTTTACACTCACGCGGCGCTATGCGAGAGTATGAGACTATATCCTCCTGTTCCGGTGGACACTAAAGTAGCGGTGCACGACGATGTTTTGCCAGATGGGACTTTAGTGAATAAAGGATGGAGAGTGACGTATCATATATATGCTATGGGAAGATCTGAGAAGATATGGGGACCGGATTGGGCCGAGTTTCGACCGGAGAGGTGGTTGACTCGGGATGAGGTTGGGAAGTGGAGCTTTGTTGGGATTGATTATTATAGTTATCCGGTTTTCCAGGCTGGGCCGAGGGTGTGTATAGGGAAGGAAATGGCATTCTTGCAGATGAAGAGGGTGGTTGCTGGGATTTTGGGGCGGTTTAGGGTGGTTCCGGCGATAGTTGAAGGGACTGAGCCGGAGTACACTGCCCACATTACCTCATTAATGAAAGGTGGCTTCCCCGTCAAGATTGAAAATGCTAGTCTAGATGAGTTAATAATAATTTAG 1530 0.4451 MELQTLISWLLFSASFIGFLFLARKTPSSTTNNTLPKSYPIFGSAFSLLANFHRRIQWTSDILQTIPSSTFILHRPFGSRQVFTAQPAVVQHILKTNFPCYGKGLTFYQSINDFLGDGIFTVDGEAWKFQRQISSHEFNTKSLRKFVETVVDVELSDRLLPVLSEASKNQTTILDFQDILQRFTFDNICMIAFGYDPEYLIPSLPEISFAKAFEESSKLSIERLNGVIPLLWKVKRFLNIGVERQLKEAVAEVRGLATKIVKNKKKELKEKAVKSESVDLLWRFLSSGHSDESFVIDMVISFILAGRDTTSAALTWFFWLLSKHSHVENEILKEITGKSETVGYDEVKDMVYTHAALCESMRLYPPVPVDTKVAVHDDVLPDGTLVNKGWRVTYHIYAMGRSEKIWGPDWAEFRPERWLTRDEVGKWSFVGIDYYSYPVFQAGPRVCIGKEMAFLQMKRVVAGILGRFRVVPAIVEGTEPEYTAHITSLMKGGFPVKIENASLDELIII 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01348 509 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 Gene3D Cytochrome P450 24 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 Pfam Cytochrome P450 36 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PANTHER CYTOCHROME P450 25 496 - -
Vifa3g01348 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01348 509 CDD CYP86A 70 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01348 Vifa-Chr3 346136091 346137684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01348 1 499 Cytochrome P450 AT5G63450 45.652 3.40e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01348 K20769 K20768 ag:AAG33645 900.968