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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa3g01314
ATGCCTCAAAGAACGAATCTCTCTTTCTTTCACAACCCAGATTTCAAAATTTTGCAGCAAAACCCTTTTGAAATTTCCTTCGAATCATTTGGTATTAATCATGATTATCTTCCCTTCAGTACGATCGATTTCTCACCGAGTTCGCAGACAAAGTCTACCAAGTCCATGAAGTCTTCTGGAGATAAAGAAGTATTGCAGAATTATAAGATGGATCAAAAGTCATATATAGGTGTACGAAAAAGGCCTTGGGGGAAGTTTGCAGCAGAGATTAGAGACACAACAAGAGGAGGGAAAAGGGTTTGGCTTGGAACCTTTGATATTGCTGAAGATGCTGCTTTAGCTTATGATCAAGCTGCATTTTCAATGAGAGGTGATAATGCTCTTCTCAATTTTTCAGTTCAAAGGGTCAAACAATCTTTGCAAGATATTCAATATGATTGCAGAAAAGGATCTTCACCTGCACTTGCACTCAAGGAGAGACACTATAACCAAAGAAAGTTGTCATCAAAAGGTGTAAAGAATAATAATAAATCAGGAAAACAAGATCAATCACAGGAATCATCATCATCAAGTATTTTGGTGTTAGAGGATTTGGGAGTTGAATATCTTGAGCAACTTCTAACTATATCTGATAATCCAAGTACAAGCAACAACAGCTACTTCAAATCAACTTGTTGA
678
0.3673
MPQRTNLSFFHNPDFKILQQNPFEISFESFGINHDYLPFSTIDFSPSSQTKSTKSMKSSGDKEVLQNYKMDQKSYIGVRKRPWGKFAAEIRDTTRGGKRVWLGTFDIAEDAALAYDQAAFSMRGDNALLNFSVQRVKQSLQDIQYDCRKGSSPALALKERHYNQRKLSSKGVKNNNKSGKQDQSQESSSSSILVLEDLGVEYLEQLLTISDNPSTSNNSYFKSTC
225
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa3g01314
225
SMART
rav1_2
74
138
IPR001471
GO:0003700|GO:0006355
Vifa3g01314
225
Gene3D
AP2/ERF domain
73
134
IPR036955
GO:0003700|GO:0006355
Vifa3g01314
225
ProSiteProfiles
AP2/ERF domain profile.
74
132
IPR001471
GO:0003700|GO:0006355
Vifa3g01314
225
PRINTS
Ethylene responsive element binding protein signature
75
86
IPR001471
GO:0003700|GO:0006355
Vifa3g01314
225
PRINTS
Ethylene responsive element binding protein signature
98
114
IPR001471
GO:0003700|GO:0006355
Vifa3g01314
225
MobiDBLite
consensus disorder prediction
168
190
-
-
Vifa3g01314
225
Pfam
AP2 domain
74
124
IPR001471
GO:0003700|GO:0006355
Vifa3g01314
225
MobiDBLite
consensus disorder prediction
166
190
-
-
Vifa3g01314
225
CDD
AP2
73
131
IPR001471
GO:0003700|GO:0006355
Vifa3g01314
225
FunFam
Ethylene-responsive transcription factor 2
73
133
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa3g01314
Vifa-Chr3
337822459
337823136
Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa3g01314
72
215
AP2-EREBP Transcription Factor Family
AT3G23240
55.102
2.44e-51
164
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Vifa3g01314
AP2
4.6e-14
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa3g01314
K14516
-
gmx:100811486
208.764
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vifa3g01314
3
337822459
337823136
Vifa3g01549
3
403893967
403894599
ECH
Vifa3g01314
3
337822459
337823136
Vifa3g01314
3
337822459
337823136
ECH
Vifa5g02671
5
888035983
888036645
Vifa3g01314
3
337822459
337823136
PCT
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