Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01295 ATGGTTTCCACTTTCACGTGGCTTCGCTACCTTAAATCCAAAGCTCAATACTCCGCCGCTCTCAGTTACAAGAACCATAAAGGAGGTCTTGTCAAAGATAATGAGCTCTTTGATTTTCTTTGGAAGCACTTCTTTCATGGAAAAATGACCTTCTTGCACTGGAATAAAGGAGAGGAGATGGCACCTACTATTTCTGGAAAAGGAGCAACTCTTCTTGTTAGGAGATTACCATTTCCAGACCGAAGATATGTTTATGTGGGAGATGTTGTGGTCTTGAAGAACCCTGAAAAGCCAGATGACTACCTAGTCAGAAGACTAGCTGCGACTGGAGGTTATGAAATGGCTTCTACTGATCAAAAGGATGAATCGTTTGTTCTTGAGCGGGGTCAATGTTGGGTAGTTGCTGAAAATGAAAAATTGAAAGTCAAGGAAGCAAATGATAGTCGAACATTTGGTCCAATTCAGATGACGAACATCGTTGGCAGAGTCCTATACTGCCTGCGGAGTGCTGTAGACCACGGCCGTGTACAGAACAGTCCTTTCAGCATGCAAAATGATTCACCGGTGTTGGAAGTGGAACTTGATGTTGATGAGATGGCAAAAAGTCACAAAGCCTGA 618 0.432 MVSTFTWLRYLKSKAQYSAALSYKNHKGGLVKDNELFDFLWKHFFHGKMTFLHWNKGEEMAPTISGKGATLLVRRLPFPDRRYVYVGDVVVLKNPEKPDDYLVRRLAATGGYEMASTDQKDESFVLERGQCWVVAENEKLKVKEANDSRTFGPIQMTNIVGRVLYCLRSAVDHGRVQNSPFSMQNDSPVLEVELDVDEMAKSHKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01295 205 SUPERFAMILY LexA/Signal peptidase 57 176 IPR036286 -
Vifa3g01295 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
Vifa3g01295 205 Gene3D Umud Fragment, subunit A 33 181 - -
Vifa3g01295 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01295 60 180 MADS-box Gene Family AT1G29960 28.906 1.89e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01295 - - ahf:112738901 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01295 3 334952499 334962979 Vifa3g01295 3 334952499 334962979 ECH