Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01283 ATGGCGAAAGAAAAACAACAAGATCATGAAAATTCCGGAGGAATCCAAGTCCAAGGCATGCAATTCTCATACGACGGACTTCAACAACTACCGCCGCTTTTCCTCGATTTCAACCTCCACGTCGCTCCTGGATCTCGATGCCTCCTCGTCGGTGCTAACGGATCCGGGAAGACGACTTTGCTCAAGATTTTGGCTGGGAAACATATGGTTGGAGGGAAAGACGTTGTGCGTGTGTTGAATTGTTCTGCTTTTCATGATACGCAGCTTGTTTGTAGTGGAGATCTTGCTTATTTGGGGGGATCTTGGAGTAAAAACGTTGGCTGCGCTGGAGACATTCCACTCCAGGGAGACTTCTCTGCAGAACATATGATATTTGGTGTCGAAGGCATAGATCCAGATAGGAGAGACAAGTTGATTGATCTGCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTTTCTGATGGGCAGCGGCGTAGAGTGCAAATCTGTCTGGGTCTTCTTCACCCATACAAGGTGCTCTTGCTGGATGAGGTTACAGTTGACCTGGATGTTGTCACCCGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAGCAGAGAGAAGCTACAATTGTATATGCAACTCACATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGAAGGCGAACTGAGAAGAGCAGAAAAAATATCAGATGTTAATGAGTTGAAATCTTCAACTAATCTACTGTCTGTTGTTGAGTCCTGGCTCCGTGCTGAAACAAAGATTGAAAAGAAGAAACCCGTCAACAATACATCCAATGCTCAAGGGAATTCTTTCGCTAGCTCTCCATTCTTTTCATCCAGACACATGGCATATTATCGATAG 888 0.4437 MAKEKQQDHENSGGIQVQGMQFSYDGLQQLPPLFLDFNLHVAPGSRCLLVGANGSGKTTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGDFSAEHMIFGVEGIDPDRRDKLIDLLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRRAEKISDVNELKSSTNLLSVVESWLRAETKIEKKKPVNNTSNAQGNSFASSPFFSSRHMAYYR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01283 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 245 IPR027417 -
Vifa3g01283 295 SMART AAA_5 43 229 IPR003593 GO:0016887
Vifa3g01283 295 Gene3D - 13 274 IPR027417 -
Vifa3g01283 295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 253 IPR003439 GO:0005524
Vifa3g01283 295 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 15 253 - -
Vifa3g01283 295 FunFam ABC transporter I family member 21 118 290 - -
Vifa3g01283 295 Pfam ABC transporter 36 69 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01283 Vifa-Chr3 329289403 329291951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01283 13 207 Calmodulin-binding Proteins AT2G36910 21.845 3.77e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01283 K12608 - gmx:100788503 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01283 3 329289403 329291951 Vifa3g01283 3 329289403 329291951 ECH