Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01260 ATGACGACACCGCCATTGACTCCGTCTGCGGCGTCATCTCCTACAGGTGGAATTGGAACCATGTGGCCGGCTCAGTCTCATGCTGCGGTTCCTACACTTCAGTTGCCAAGAAGCAGATTGAAAACTGCATTGAATGCTAGAGATGATACTCAATTTCTAGAACTTGAAAATCGCCTTATGCAGAAGCTAATGATTGAAGAGATGACAGGTCTTTCATTCCCTTCAAATAGGCTTGCAGGTGTGAATCCTGCTAACCTCGAAGACATTCTCGGTTCCCACATACAATCTCCAACATCTATTCATGTGCATCCGAATGTGACTCAGCAACTTTGGGGCTTTTCTGCTGACCTTACCAATTCAAAAAATGATGCCCTGTCGAAGCGGAGCCAGAGCTTTATCGAGCGCAGCAGCATGGAGAACCTTAGTTCTAAGATTCCTTCTGCTACCTCGGTGGCCATGGAGCCATATGCTAACTTCTCTGATTGGGGCTCCCCTGATGGAAAATTAGACTGGTCCATCCGTGGCGATGAACTGAATAAGATGAAAAAGTCTTATTCTTTCGGTTTTCGAAACCAACTTAGCAATTCAACAATGGTTGCACAAAATGCTGATGAGCAGGATGTATCAATAACCCATGAATCATGGGTTAACTCAGTAGTGCAATCGGATTCATATTGTGTTGAAGTGTAA 690 0.4478 MTTPPLTPSAASSPTGGIGTMWPAQSHAAVPTLQLPRSRLKTALNARDDTQFLELENRLMQKLMIEEMTGLSFPSNRLAGVNPANLEDILGSHIQSPTSIHVHPNVTQQLWGFSADLTNSKNDALSKRSQSFIERSSMENLSSKIPSATSVAMEPYANFSDWGSPDGKLDWSIRGDELNKMKKSYSFGFRNQLSNSTMVAQNADEQDVSITHESWVNSVVQSDSYCVEV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01260 229 MobiDBLite consensus disorder prediction 1 22 - -
Vifa3g01260 229 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01260 Vifa-Chr3 324976025 324976714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01260 3 97 C2H2 Transcription Factor Family AT5G12850 36.190 3.95e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01260 - - psat:127084564 285.419