Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01220 ATGTCCAAAGAAAAAAACTCAAAGCACAATCCATCAAATCTAGTTGCCAAATTAATGGGGCTTGAAACCCTTCCAAAGGGAGAGCCGAATTTGTCAAAAGATTATTCTGAAGACATTTATGATCATCTAGGGTGGCCATTGAAACATAGAAAGGTGGAAGATAGGTTTATGATGTGTAATAAGGAAATGCTTCATGGAGTTCGTAATTCAAGTGCAGAACAGATTGGTTACGGAGATGGATATGAAACATGGCTGCAATCTCATAGAGGAAGGTGGAGGGAAGATTTTGATGAAGGGAAAATGGCTCTTGTTCGTCAGAAATTCATTCAGGCGAAGAATATGTCAACACATGAGGCGCTGCGCCAGTCCAAGCAATTTCAAGATGCGTTGGACATTTTAAGCTCAAACAATGATCTCTTGGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCCTCTACTCCACCGGACGATGCAAATCGCATTACCCTTATCAAACCTTTGAAGATGTATGGAAATGATAAATCTTCTGGAAAGGGTAAGAAGAATGATAGATTGATTAAGAAACCAGCAAATTCTGATCAAACAACTGTAAGGGAGAATATTAACCATGGATACTCTCCGGAATCTACTCGAATAGTGGTATTGAAGCCTAGTCCTGGAAGGACTCATGATCTTAAGTCTATGGTTTCTCCGAGAACTCAATCACCTCAAAGTTTCTATCAAGGAAATGGAAATGACGATGTACTTGAATCCATACAAGTGTCTAAAGAGATTACATTGCAAATGCATCCAAATGATAAAACTTTACATTCTTCAGTATTTTCCAGTGGCTATTCAAGTGATGAGAGCTTATTTGACAAATCTTATCATGATTTGGAAGCTGTGTCACCAATGCCAAGGCATTCATGGGATTGCATCATCAATGTATGTGGAAGTCCTTATTCTACACAATCCTTGGGTCGTGCGACGTGTTCTCCCGAGTCATCTGTCTGCATAGAGGCAAAGAAACGGCTTTCCGAAAGATGGAACGTGATAACATCTGTTGAAAAAGGTCATCAAGAACAAAGCCGTGTGACAGGCAACTCTACTCTCGGTGAAATGCTTTCTCTTTCCCTCATAAGAAAATCGGTAACATCTGAGGTTGAAAGTACTAATAAACACCAAGAAGAACAAAGCAAATCTGTTTCTTGCAGTCAATCTTTCAATGAAGAATTGATCATTAATAATTCTCCTCAAAATGTTTCTCTGTTAAATTCTGTTCCTGCATCTTCTACTGCCTATGAACCTGCCTTCGGCATTGACGCTGACAAAGAACATGGCTCCAAGGTGGTGGCAAAGTCAAAGAGTAAGAGATCATCATTTAAAGGGAAAGTTGCAAGTTTCTTGTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATCTAGATCATCTCAATCAAAAGACGAATCCGAATTGGCTGTCACTGAAACATCAATACCGCAAGTAAAGTCACCAGGAGTCCTTGGAGATAATGTGTCTCAAAGCTTTAATGTTGGTGAGTTTGATGAATCTCTTGCAGCTAAATGTGAATCATTAGGCAAAACTTCAACAGATTCAGTCTCTAGTGGACAAGAAGATATGATTACACTAGAGCCTGGATCAAGTGAGTCAAAGCTTGTGGTGCTTGAGATTTCAAATGAAAAACAGGATCAGCCTAGTCCATTCTCAGTGTTAGAATCTACATTTGAAGATTACAATACAGCTCATGAGTCCTTGCAATGCATGAAAAGTGGTCACATGGAATCGCTGGAGCCTCTGAAGTCGAAGTTAATTGACAAATCACCACCTATAGAATCAGTAGCTAGGACCCTATCATGGGATGATGATTCTTGTGGAGAGTTAACAAGTCCTTATTATCCATTAAAACCTTTAAGGACTTCTTCCTTAGAGACCAAGTTAGAGGAACATGAATGGCTTCTCTTGGTCCAAAAACTATTATCAGCATCTGGACTTGATGATGATGATGATGATGATCAAGAACAACAGTATGAGTCATTTCACACAAGATTTCACTCTCTTGAAAGCCCGTTGGACCCATCATTGAGGGACACATATGCCAACATAAATGACAACAAGGACAATACACAGCCTCTTAATGAGGCTAAGAGAAGGAAAATGAGGTCAAATCAGAAACTTATATTTGATTGTGTTAATGCTGCACTATTGGAAGTTGTTAGTTGTGGTGATGGGTCAGAGAATTACTTCAAGATGTACTGTGGGACCAACAGAAGGCCCTTCCAAGTTCAAGAGGGTTCATGTTTAATGGACCACATTGTGGCCTATATGAAGGAATTAATAGCAAATGGGATGAAGTTTGTTTGGGGCGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGCATGTTGGGTTGGTTGAGGTTATGAGAAAAGAGATTGAAGCTTTGGGGAGGGAAATAGAAGAAAATATTATAGAAGAACTTGTGGAGAATATTGTGCTTGATATTACAAGCAGATGA 2538 0.3924 MSKEKNSKHNPSNLVAKLMGLETLPKGEPNLSKDYSEDIYDHLGWPLKHRKVEDRFMMCNKEMLHGVRNSSAEQIGYGDGYETWLQSHRGRWREDFDEGKMALVRQKFIQAKNMSTHEALRQSKQFQDALDILSSNNDLLVRFLDSQKLYQLPSTPPDDANRITLIKPLKMYGNDKSSGKGKKNDRLIKKPANSDQTTVRENINHGYSPESTRIVVLKPSPGRTHDLKSMVSPRTQSPQSFYQGNGNDDVLESIQVSKEITLQMHPNDKTLHSSVFSSGYSSDESLFDKSYHDLEAVSPMPRHSWDCIINVCGSPYSTQSLGRATCSPESSVCIEAKKRLSERWNVITSVEKGHQEQSRVTGNSTLGEMLSLSLIRKSVTSEVESTNKHQEEQSKSVSCSQSFNEELIINNSPQNVSLLNSVPASSTAYEPAFGIDADKEHGSKVVAKSKSKRSSFKGKVASFLFSMSKKSTKKKSRSSQSKDESELAVTETSIPQVKSPGVLGDNVSQSFNVGEFDESLAAKCESLGKTSTDSVSSGQEDMITLEPGSSESKLVVLEISNEKQDQPSPFSVLESTFEDYNTAHESLQCMKSGHMESLEPLKSKLIDKSPPIESVARTLSWDDDSCGELTSPYYPLKPLRTSSLETKLEEHEWLLLVQKLLSASGLDDDDDDDQEQQYESFHTRFHSLESPLDPSLRDTYANINDNKDNTQPLNEAKRRKMRSNQKLIFDCVNAALLEVVSCGDGSENYFKMYCGTNRRPFQVQEGSCLMDHIVAYMKELIANGMKFVWGGDSHSLVVENVVRKEVVHVGLVEVMRKEIEALGREIEENIIEELVENIVLDITSR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01220 845 MobiDBLite consensus disorder prediction 220 241 - -
Vifa3g01220 845 MobiDBLite consensus disorder prediction 176 190 - -
Vifa3g01220 845 MobiDBLite consensus disorder prediction 173 195 - -
Vifa3g01220 845 MobiDBLite consensus disorder prediction 473 493 - -
Vifa3g01220 845 Pfam Domain of unknown function (DUF4378) 657 836 IPR025486 -
Vifa3g01220 845 Pfam Protein of unknown function (DUF3741) 105 146 IPR022212 -
Vifa3g01220 845 Coils Coil 812 832 - -
Vifa3g01220 845 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01220 Vifa-Chr3 317148802 317152135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01220 1 843 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 33.444 3.37e-106 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01220 3 317148802 317152135 Vifa3g01220 3 317148802 317152135 ECH