Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01212 ATGAGACTGTGTAACCTTAAGAAAGATGCAAAGACGAACATCCATGCTATTATTGACAAGTTAGCAGAGAGAGGTCTTCGTTCTCTTGCTGTTTCTAGACAAGTATTTTATATCTGGAGGTTCTTGAGAAAACTAAAGAAAACTAATGATTTTCAATTTGTGAAGTTGTTGTTCTTCTTCATCAACTATGGAAAAGGTATTGACTTTCATGAGATTTTCACGGTAATCATCTTTTCCTCACTTTTCAAGTTTTTGGCAAGGTTCAACCATCGCTCTGGAATCGGTGGTGTCTCGGAGTTCCTTGGTTGGACAGATCAACAGAGAGCCGCTGCAGCCAAGGAAGGCTGGGGATACAGATTAGTGTTTTCTGCACGCCTGATTGGATTATTTCTTGTTGCCGATGCATTATTTATCGGTGCTCAGCAAGCTGGACGCTATCTTCAGGAAATCAGAACCCATTGA 462 0.4069 MRLCNLKKDAKTNIHAIIDKLAERGLRSLAVSRQVFYIWRFLRKLKKTNDFQFVKLLFFFINYGKGIDFHEIFTVIIFSSLFKFLARFNHRSGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGLFLVADALFIGAQQAGRYLQEIRTH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01212 153 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 92 151 IPR044664 -
Vifa3g01212 153 Gene3D - 1 60 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01212 Vifa-Chr3 315272733 315275612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01212 92 153 Sulfurtransferasese or Rhodanese AT4G24750 75.806 1.86e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01212 - - tpra:123897303 121.709