Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01204 ATGGCTGATTCAACAACTTCTAATGCCACACGCGCATGCTCTCATTTCCTACCAACGGTTACATTATTCGACTGGTGGCTCGTTAAATCTCCAGATAACCGCTTATCCATCTCCGGCATCTCTTCCAGAAAGGGAGAAGCTGTTCGCGTGTTTAATTCTTCTCCTATTGTTGAAAGATTCGATGTGTATTCCCTTAAGACTGCCGATGGTATATACATTTTGATTAGGGGTATCATCAATGAGGAGCGCACCTTGGAAAAAGGTTTTACTCCTGAGATTTTCAATGGTTTTTACACTGGCTTTCCTCCAAACTGGGAAACTTGTTGGTTTGCACATTACGTCGGAGAACAAGTAGAACCTGCTACTGATTCAGTCAATGCTGCTATGGGTAATGTATCTGCAATTTGCGAAGACATTTCGTCTGACGAAGAGGAAAAATCCATTTCTGTTTTGTTGGAATTGCCTGAAGAAGCCCCACAAAATAACCAGACACCATTCCTTGGAGATGAATGCGAAGTCTCAAAGGAGATTTGTGGGGTAGATGTTGCTTGTGGTAGTGGGGTAGATGTTTTTGTTTTGTCGGAATTGCCTGAAGAAGCCCCAGATAATAACCAGACAACATTCCTTGGAGATGAATGTGAAGTCTCAAAGGAGACTAGTGGGGTAAATGTTGCTAGTGGTAGTGGTGTAATTAGACGTAGTACCAGGTTGCATAGTATAAACGTCTGTCCGCAGCAGAAGAAGAAAAAGAAGGCGAAGCAGCAGCCTACGTCTAGAAGTCCTCTCAAGCATCCACATGAAGCGCCAAGCTCTACCTCCAAGGCAGTGGAAAATCGTTATTCGGATACTGTGCATCTTGATAATGTATCAGCAATTCTTCCAGAAATATCATCTGGTGATGAGGAAAAATCCATTCCTGTTTTGTCGGAATTGCCTCAAGAAGCCCCAGAAAATAACCAGACATCATTCCCTGGTGATGATTGCGAAGTCTCAAAGGAGATGCGTGGGGTAAATGTTGCTAGTGGTAGTGTTCAAAATAGACGTAGTACCAGGTTGCATAGTATTAACGTCTGTCAGAATCAGAAGAACAAAAAGAAGCCGAAGCAGCAGCTTACGTCTAGAGTTCCTCTCAAGCACCCACATGAAGAGCCAAGCTCTACCTCAAAGGCAGTGGAAAATCGTGATTCAGATACTGTGCATCTTGATAATGTATCAGCAAATCTTTCAGAAATATCATCTTGTGCTGTGGAAAATTCTTTTCCTACTTCATCGGTAACACCGGAAAAGGCCACAGGACATTGCAATAAGTTATTCCTTGAAGGTGAAGAAGATATGTCAATTAAGACGAGTGAAGCCAATGTTGTTCATGGTAGTGACGGGAATAGACGTAGTGGCCGGTTGCGTAATGTTACATCCTTCCAGAAGAAGCAACCTGCTACTGGAGGTCCGACAACACGTCGAAGTAAAGACCAGATCTCTGCCTCAGCAACCACAGAAAAGAGTGATGGGGGGCTGGAAAATCTCTCGACACCCGTTCAGTCACAAAGTGGAATAGTAAAAACGCTGTCTGGGCAAGTCACTAATAAATTCAGTTCCAAAATTTCCAAAACTTCTTCAGCAAAAACTGAAGTGGGTCATAAGAAAAAAAAGGTGACAGTTGAAACAGAAGCGGTCAATCCTAAGAGAAAAGTTATGAAATCCTCATCTTCGGTAAAATCTCCCCAAGGAAGGGATGCAAGTCACTTGAACAAGGGAAGTAAACAGGGACTATCCATAGTTTCCCCGGAGTCACTAAGTGTTAAAAAATCCAGATCTGGTAGGTTACTTCTACCTTCCTTGGAGTTTTGGCGCAATGAAATACCCATTTATAATGCGGACCGTGAGATTAAAGAAATTCAGCAAGACTTGACTACGACACCACCTTTTAGATGCTTTTAG 1938 0.4278 MADSTTSNATRACSHFLPTVTLFDWWLVKSPDNRLSISGISSRKGEAVRVFNSSPIVERFDVYSLKTADGIYILIRGIINEERTLEKGFTPEIFNGFYTGFPPNWETCWFAHYVGEQVEPATDSVNAAMGNVSAICEDISSDEEEKSISVLLELPEEAPQNNQTPFLGDECEVSKEICGVDVACGSGVDVFVLSELPEEAPDNNQTTFLGDECEVSKETSGVNVASGSGVIRRSTRLHSINVCPQQKKKKKAKQQPTSRSPLKHPHEAPSSTSKAVENRYSDTVHLDNVSAILPEISSGDEEKSIPVLSELPQEAPENNQTSFPGDDCEVSKEMRGVNVASGSVQNRRSTRLHSINVCQNQKNKKKPKQQLTSRVPLKHPHEEPSSTSKAVENRDSDTVHLDNVSANLSEISSCAVENSFPTSSVTPEKATGHCNKLFLEGEEDMSIKTSEANVVHGSDGNRRSGRLRNVTSFQKKQPATGGPTTRRSKDQISASATTEKSDGGLENLSTPVQSQSGIVKTLSGQVTNKFSSKISKTSSAKTEVGHKKKKVTVETEAVNPKRKVMKSSSSVKSPQGRDASHLNKGSKQGLSIVSPESLSVKKSRSGRLLLPSLEFWRNEIPIYNADREIKEIQQDLTTTPPFRCF 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01204 645 MobiDBLite consensus disorder prediction 562 592 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 338 366 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 258 277 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 531 550 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 451 516 - -
Vifa3g01204 645 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 390 634 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 338 397 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 242 277 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 375 397 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 243 257 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 464 516 - -
Vifa3g01204 645 MobiDBLite consensus disorder prediction 558 592 - -
Vifa3g01204 645 Pfam SANTA (SANT Associated) 20 107 IPR015216 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vifa3g01204 SANTA 5.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01204 - - mtr:25484135 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01204 3 312680993 312685251 Vifa3g01204 3 312680993 312685251 ECH