Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01203 ATGGAGAACCAAAAGACAGAAACTTGGATTGAAAAAGCAAAACCATTCATAGCTGTTTTGTCTTTGCAATTAGGATATGCAGTTATGGATGTTTTATCAAAAGCTGCATTGAATAAAGGAATGAGCAACTATGTTTTTGTTGTCTATCGTCACGCTGTTGCATTTATTGTCATCACTCCTTTTGCACTCTATTTTGAAAATAAAGTGAGACAGAAAATGACAATTTCAATCTTCATCAAGATAACGGTGCTCGGCTTGCTAGAGCCAGTTATAGATCAAAACATGTATTTTTTGGGAATGAAATATACAACAGCAACCTTTGCAGCTGCCATGACCAATATGCTTCCTGCCATTACTTTTATATTGGCTACCATTCTTAGGCTAGAGAAGATAAAGATAAAATGTATACGAAGTCAGGCAAAGGTGTTGGGTACCATAGCAACCGTTGCAGGTGCCATGATGATGACGCTAGTTAAAGGCCCAATACTTTTTGAAGCATTTGGAAGCAATAGTGACAATCATGATAGTGGTGATATAACTAGCCAACATGTAATAGCTGGAGGAGTGTTGATCACAATAGGATGCATTTCTTGGGCTTGTTTTTTTAATCTTCAAGCGATTACCCTTCGAAGCTACCCTGCAACTCTTTCTCTTTCGTCATGGATATGCCTCATGGGCACAATTGAAGGTGCAGCATTGGCTTCGATTATGGAATGGGGTAATCCTTCAGTTTGGTCCATAAAATGGGATATGAGATTGTTATCTACTATCTACGCAGGCATATTTTGCTCGGGTCTAGGTTATTACTTGCAAGGAGTAGTGAATCAAACAAGAGGGCCAGTTTTTGTCACAACATTTAGTCCCTTATGTATGGTTATTGTTGCTATTATGGGATACTTTCTTCTTGCAGAACAAATGTTCCTCGGAAGGGTGATAGGTGCATTTATAATTTGTTTGGGCTTGTACCTTGTTGTGTGGGGAAAAAACAAAGATTATAATAACACATCAGATACAGTTAATGAAGAGCCTCTTCAAAAAGCTAAGGAGACTGCAGGTGAAAATTGCACTCATGAAGTCATCACTATTCACTAA 1092 0.3819 MENQKTETWIEKAKPFIAVLSLQLGYAVMDVLSKAALNKGMSNYVFVVYRHAVAFIVITPFALYFENKVRQKMTISIFIKITVLGLLEPVIDQNMYFLGMKYTTATFAAAMTNMLPAITFILATILRLEKIKIKCIRSQAKVLGTIATVAGAMMMTLVKGPILFEAFGSNSDNHDSGDITSQHVIAGGVLITIGCISWACFFNLQAITLRSYPATLSLSSWICLMGTIEGAALASIMEWGNPSVWSIKWDMRLLSTIYAGIFCSGLGYYLQGVVNQTRGPVFVTTFSPLCMVIVAIMGYFLLAEQMFLGRVIGAFIICLGLYLVVWGKNKDYNNTSDTVNEEPLQKAKETAGENCTHEVITIH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01203 363 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
Vifa3g01203 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 330 - -
Vifa3g01203 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Vifa3g01203 363 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Vifa3g01203 363 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01203 Vifa-Chr3 311144057 311145775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01203 1 362 Nodulin-like Gene Family AT2G37460 63.315 1.60e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01203 - - gmx:100811147 499.204