Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01150 ATGACTTCTGTCACCGTTCGTCCTCCTCCGCTAACTTCAACTTCGGAGCCACCTCCCCTTTTCGACGGAACCACAAGGTTGTACATCAGTTATACTTGCCCCTTTGCACAACGTGTATGGATCACTAGAAACTACAAGGGACTAGAAGACAAGATTAAATTGGTTCCTATTGACCTTCAAAACAGGCCTGCATGGTATAAGGAAAAAGTTTACCCTGAAAATAAGGTGCCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTAGTCAAATATGTGGATGCCAACTTTGAAGGAACACCTCTCTCTCCCAATGATCCTGCCAAGAAAGAGTTTGCTGAGCAGTTGTTATCCCATGTTGATACCTTTGTCAAAGACTTGTACGGCTCATTCAAAGGGGATACTGTGCAACTAGCCAGTACTGCTCTTGAGTACTTGGAGAACGCCCTTGGTAAATTTGATGACGGCCCATTCCTTCTTGGTCAATTCAGTTTGGTGGATATTGCTTATGTTCCATTCGTTGAAAGATTCCACATTATCCTTCCTGAATTGTTCAAGTTTAACATCACAGAAGGAAGACCTAAACTTACAACATGGATCGAGGAGCTGAACAAGATTGATGCTTATACACAGACAAAAGTGGATCCTCAAGAAACTGTTAATACTTACAAGAAACGTTTTCTGCCTCAACAGTGA 705 0.4227 MTSVTVRPPPLTSTSEPPPLFDGTTRLYISYTCPFAQRVWITRNYKGLEDKIKLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDANFEGTPLSPNDPAKKEFAEQLLSHVDTFVKDLYGSFKGDTVQLASTALEYLENALGKFDDGPFLLGQFSLVDIAYVPFVERFHIILPELFKFNITEGRPKLTTWIEELNKIDAYTQTKVDPQETVNTYKKRFLPQQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01150 234 FunFam Lambda class glutathione S-transferase 102 233 - -
Vifa3g01150 234 Pfam Glutathione S-transferase, C-terminal domain 140 204 - -
Vifa3g01150 234 SFLD Main (cytGST) 26 207 - -
Vifa3g01150 234 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
Vifa3g01150 234 Gene3D - 102 233 - -
Vifa3g01150 234 CDD GST_C_Lambda 109 227 - -
Vifa3g01150 234 FunFam Glutathione S-transferase L2, chloroplastic 1 101 - -
Vifa3g01150 234 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Vifa3g01150 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Vifa3g01150 234 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Vifa3g01150 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 230 IPR044629 GO:0004364
Vifa3g01150 234 Gene3D Glutaredoxin 1 101 - -
Vifa3g01150 234 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01150 Vifa-Chr3 298834835 298836564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01150 4 231 Glutathione S-transferase Gene Family AT5G02790 67.982 5.12e-117 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01150 K00799 - gmx:547597 390.578