Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01149 ATGACTTCTATCACCGTTCGTCCTCCTCCGCTAACTTCAACTTCGGAGCCACCTCCTCTTTTCGACGGAACCACAAGGTTGTACATCTGTTATAGTTGCCCCTTTGCACAACGTGCATGGATCACTAGAAACTACAAGGGACTAGAAGACAAGATCGAATTGGTTCCTATTGACCTTCAAAACAGGCCTGTATGGTATAAGGAAAAAGTTTATCCTGAAAATAAGGTGCCATCTTTGGAGCATAATGGCAAGGTATTGGGAGAAAGTCTGGATTTAGTCAAATATATTGATGCTAACTTTGAAGGGACACCTCTCTCTCCCAATGATCCTGCCAAGAAAGAGTTTGCTGAGCAGTTGTTATCCCATGTTGATACCTTTGTCAAAGACTTGTACGGTTCATTCAAAGGGGATACTGTGCAACTAGCCAGTACTGCTCTTGAGTACTTGGAGAACGCCCTTGGTAAATTTGGTGATGGCCCATTCCTTCTTGGTCAATTCAGTTTGGTGGATATTGCTTATGTTCCATTCGTTGAAAGATTCCACATTATCCTTCCTGAATTGTTCAAGTATAACATCACAGAAGGAAGACCTAAACTTGCAACATGGATAGAGGAGCTGAACAAGATTGATGCTTATACACAGACAAAAGTGGATCCTCAAGTACTTGTTGATTATTACAAGAAGCGTTTTCTGCCTCAACAGTGA 705 0.4184 MTSITVRPPPLTSTSEPPPLFDGTTRLYICYSCPFAQRAWITRNYKGLEDKIELVPIDLQNRPVWYKEKVYPENKVPSLEHNGKVLGESLDLVKYIDANFEGTPLSPNDPAKKEFAEQLLSHVDTFVKDLYGSFKGDTVQLASTALEYLENALGKFGDGPFLLGQFSLVDIAYVPFVERFHIILPELFKYNITEGRPKLATWIEELNKIDAYTQTKVDPQVLVDYYKKRFLPQQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01149 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 230 IPR044629 GO:0004364
Vifa3g01149 234 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Vifa3g01149 234 FunFam Glutathione S-transferase L2, chloroplastic 1 101 - -
Vifa3g01149 234 CDD GST_C_Lambda 109 227 - -
Vifa3g01149 234 SFLD Main (cytGST) 26 207 - -
Vifa3g01149 234 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Vifa3g01149 234 Pfam Glutathione S-transferase, C-terminal domain 140 204 - -
Vifa3g01149 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Vifa3g01149 234 Gene3D Glutaredoxin 2 101 - -
Vifa3g01149 234 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
Vifa3g01149 234 Gene3D - 102 233 - -
Vifa3g01149 234 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Vifa3g01149 234 FunFam Lambda class glutathione S-transferase 102 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01149 Vifa-Chr3 298797061 298799218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01149 7 231 Glutathione S-transferase Gene Family AT5G02790 65.778 3.70e-112 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01149 K00799 - gmx:547597 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01149 3 298797061 298799218 Vifa3g01149 3 298797061 298799218 ECH