Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01148 ATGGCCACTACTATAGGAGTGCAACCGATTCGTCCTCCACTGTTATCTCCAACTTCTGAACAACCTACACTTTTTGACGGAACCACCAGGTTGTACACCAGTTATGTTTGTCCCTTTGCACAACGTGTATGGATCGCTAGGAACTATAAGGGGCTACAAGACAAGATCCAATTAGTTCCTTTTGATCTTCAAAATAGACCTGCATGGTATAAGGAAAAAGTTTATCCTGAAAATAAGGTGCCTTCTTTGGAGCACAATGGCAAGATATTGGGAGAAAGTCTTGATTTGATCAAATATATTGATGCTAACTTTGAAGGAACACCTCTCTTTCCCAATGATCCTGCCAAGAAAGAGTTCGGCGAACAGTTGTTATCCGAGGTTGATATCTTTGTCAAAGACTTTTTCAATGCATTAAGAGGGGATACTGTGCAACAATCCCATCCTGCTTTTGAATTCTTGGAGAATGCTCTTGGTAAATTTGATGATGGACCATTCTTGCTTGGTCAATTCAGTTTGGTGGATATTGCCTACATTCCTTTTGTTGAAAGATTCCATGTTGTCCTGCTTGAGGTGTTCAAGCACGACGCCACAGAAGGAAAACCTAAACTTACAAAATGGATTGAGGAGTTGAACAAGATTGATGCTTATACACAGACAAGAGAGGATCCTCAAGATATCGTTGATATTGTCAAGAAACGTTTTATGCCTCAGAAGTGA 717 0.4031 MATTIGVQPIRPPLLSPTSEQPTLFDGTTRLYTSYVCPFAQRVWIARNYKGLQDKIQLVPFDLQNRPAWYKEKVYPENKVPSLEHNGKILGESLDLIKYIDANFEGTPLFPNDPAKKEFGEQLLSEVDIFVKDFFNALRGDTVQQSHPAFEFLENALGKFDDGPFLLGQFSLVDIAYIPFVERFHVVLLEVFKHDATEGKPKLTKWIEELNKIDAYTQTREDPQDIVDIVKKRFMPQK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01148 238 SUPERFAMILY Thioredoxin-like 22 109 IPR036249 -
Vifa3g01148 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 7 235 IPR044629 GO:0004364
Vifa3g01148 238 FunFam Lambda class glutathione S-transferase 106 237 - -
Vifa3g01148 238 SFLD Glutathione Transferase (cytosolic) 30 211 IPR040079 -
Vifa3g01148 238 MobiDBLite consensus disorder prediction 1 21 - -
Vifa3g01148 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Vifa3g01148 238 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Vifa3g01148 238 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Vifa3g01148 238 Pfam Glutathione S-transferase, C-terminal domain 143 208 - -
Vifa3g01148 238 SFLD Main (cytGST) 30 211 - -
Vifa3g01148 238 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Vifa3g01148 238 Gene3D Glutaredoxin 2 105 - -
Vifa3g01148 238 Gene3D - 106 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01148 Vifa-Chr3 298773504 298775639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01148 11 235 Glutathione S-transferase Gene Family AT5G02790 67.556 4.60e-114 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01148 K00799 - gmx:547597 394.045