Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01121 ATGACAGATGTACTATGTGAGGTACTTATCATGATAATGTTGGAACATCCTAATGTCAATCTCATCGAGGTGATTGATGACCCAGAGTCGGACGACTTCTACATGGTACTCGCATATGTGGAAGACAAATGGGTTTGTGAGGGTTCAGGTTGTCAATGTGCCGTAGGTGAAGAGACCGCTAGGAAATACATGTGTGATATAGTCTCGGGATTAACATATCTTCATGCTCATGTATTATCCCTCAGCCAATCATTTTTGCGTGTTAATGTTATCCATCACATCATTTATTTGTTGGTGGTTACACTCATTCATTTGAACATATTTTGA 327 0.3945 MTDVLCEVLIMIMLEHPNVNLIEVIDDPESDDFYMVLAYVEDKWVCEGSGCQCAVGEETARKYMCDIVSGLTYLHAHVLSLSQSFLRVNVIHHIIYLLVVTLIHLNIF 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01121 108 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 4 92 - -
Vifa3g01121 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa3g01121 108 SUPERFAMILY Protein kinase-like (PK-like) 3 79 IPR011009 -
Vifa3g01121 108 Gene3D Transferase(Phosphotransferase) domain 1 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01121 Vifa-Chr3 293335980 293336662 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Vifa3g01121 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01121 K00908 - gmx:100776013 133.265