Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01113 ATGGCCACCAACAACACTTGTTCTTACTCCTCTTTCCTCTTTTCTTTATTGCTTATACTACATTTTACTTTAGGGAAAAGCCAGCTACAGGTGAATTATTATTCTAGCAGCTGCCCAAAAGCTGAAGAAATCATCAAACAACAAGTCATTGACCTTTATCATGAGCATGGAAACACAGCCATTTCATGGGTTAGAAATCTCTTCCATGATTGTGTTGTTAAGTCATGTGATGCGTCTCTGCTTTTAGCGACGGCACACGGTGTAGTATCGGAGCAGACATCAGAGAGAAGTTTTGGGATGAGAAACTTCAAGTATGTCGATACGATCAAAGCTGCTGTTGAGAAAGAATGTCCCATGACAGTGTCATGCGCTGATATTGTTGCTCTTTCCGCTAGAGATGGCATTGCCATGTTGGGAGGTCCTTCAAACATTGAAATGAAGACAGGAAGAAAGGATAGCAAAGAAAGTTATGTAGCAGTGGTGAAAGACTTGATTCCAAACCATAATGACTCTATATCCTCAGTGCTATCTCGTTTTCAAGACATTGGTGTTGACCTTGAAGCCACAGTTGCTCTTTTAGGAGCACACTCAGTTGGAAGAGTACACTGCATGAATCTAGTCCACAGACTCTACCCAACAGTGGACCCAACACTAGACCCCACACATGCCGCATACCTAAAACGTAGGTGTCCAACACCAAATCCAGATCCAAGAGCTGTCGAATACGTGAGAAACGATCTAAAAACACCTATGATAATTGACAACAATTACTACAAGAACATTTTACAAAACAAGGGTCTTCTCACTTTGGATGCTGAGTTAGCCACTGATCCAAAAACAGCACCTTATGTACAAAAAATGGCAGATGATAATGGTTACTTCAATGAACAATTCTCAAGGGCTATTGTTTTGTTGTCGGAGAATAATCCTCTTGTTGGAGATCAAGGTGAAGTTAGAAAGGATTGTCGCTTTGTTAATGCAAATTAA 987 0.4073 MATNNTCSYSSFLFSLLLILHFTLGKSQLQVNYYSSSCPKAEEIIKQQVIDLYHEHGNTAISWVRNLFHDCVVKSCDASLLLATAHGVVSEQTSERSFGMRNFKYVDTIKAAVEKECPMTVSCADIVALSARDGIAMLGGPSNIEMKTGRKDSKESYVAVVKDLIPNHNDSISSVLSRFQDIGVDLEATVALLGAHSVGRVHCMNLVHRLYPTVDPTLDPTHAAYLKRRCPTPNPDPRAVEYVRNDLKTPMIIDNNYYKNILQNKGLLTLDAELATDPKTAPYVQKMADDNGYFNEQFSRAIVLLSENNPLVGDQGEVRKDCRFVNAN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01113 328 Pfam Peroxidase 46 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 SUPERFAMILY Heme-dependent peroxidases 28 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 CDD secretory_peroxidase 28 325 IPR033905 GO:0004601|GO:0042744
Vifa3g01113 328 FunFam Peroxidase 32 175 - -
Vifa3g01113 328 ProSiteProfiles Plant heme peroxidase family profile. 28 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 Gene3D - 32 326 - -
Vifa3g01113 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa3g01113 328 Gene3D Peroxidase, domain 2 166 305 - -
Vifa3g01113 328 FunFam Peroxidase 166 305 - -
Vifa3g01113 328 PANTHER - 13 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01113 Vifa-Chr3 291439478 291441630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01113 31 326 Peroxidase AT2G37130 73.986 9.00e-171 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01113 K00430 - gmx:100785485 533.487