Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01064 ATGGCTCTCTTAATCCTCTACTTTGCATATCTTTTCTTCTTTGCCTTCTTAACCATTATGGTCCAAAAGATGAGAAAGAAGAAAAACTATTCAACTTTTAACATACCACCAGGACCTAGAGAGTTACCCATTATAGGAAATATTCACAATCTGTTAAGCTTTCAACCCCATTGGAAATTAAGAGAATTGGCCAAAAAATATGGACCCATAATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCACCCGAGTGGGCTATGGAGGTGATGAAAACCCATGATATTAACTTTGCATCAAGGCCTCGACTCCTTGCTACAGATATAGTAGCTTACAATTCCACAAATATAGCTTTTGCTCCATATGGTTATTACTGGAGACAGCTAGGAAAAATCTGCACATTGGAGCTTTTAAGCCTAAAAAGGAATGGATCGCCAATCAATCTCACTGAAGCTTTGATTTCTTCAATATACATTATTGTTTCGAGGTCCGCCTTTGGAAGTAAATGCAAAGACCAAGAAAAATTCATATCAGCGCTAAAAGAATCGATAAAGGTTGTAGGAGGTTTTGACTTGGGAGATTTGTTTCCTTCTGCTAAATGGCTACATGTTACTGGGTTGAGGCCTAAGCTTGAGAGGTTTCATCGCCAAACAGATCAGATAATAGAAAATATCACCAATGAACATAAAGAGGCAACGAACACAAAAGCCAAAGATGATCAAGGTGAAGTACAAGATGATCTGATATATAATGAAGTTGAACAAAATAGAAAGTTTCGTACCGGAATCGTAGTTGGACGGCGGAGGACGTTTCGAAGACGACGAACAAACGGTGAACGGACGACGAAACGGCCGGCGAAGGATGTCTTCGTGCAGGCGGCGGCGAGAAGACGTGAAACGACGGACCGACGTGTGCGATACAGGGGTGGAACGGCGGCGTATGCGTGA 954 0.414 MALLILYFAYLFFFAFLTIMVQKMRKKKNYSTFNIPPGPRELPIIGNIHNLLSFQPHWKLRELAKKYGPIMHLQLGEVSTIVISSPEWAMEVMKTHDINFASRPRLLATDIVAYNSTNIAFAPYGYYWRQLGKICTLELLSLKRNGSPINLTEALISSIYIIVSRSAFGSKCKDQEKFISALKESIKVVGGFDLGDLFPSAKWLHVTGLRPKLERFHRQTDQIIENITNEHKEATNTKAKDDQGEVQDDLIYNEVEQNRKFRTGIVVGRRRTFRRRRTNGERTTKRPAKDVFVQAAARRRETTDRRVRYRGGTAAYA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01064 317 Gene3D Cytochrome P450 28 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01064 317 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01064 317 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01064 317 SUPERFAMILY Cytochrome P450 29 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01064 317 Pfam Cytochrome P450 36 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01064 317 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 145 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01064 Vifa-Chr3 271324996 271326103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01064 1 262 Cytochrome P450 AT1G13110 31.525 3.40e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01064 - - tpra:123912942 350.517