Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01063 ATGGCTCTCTTAATCCTCTACTTTGCATATCTTTTCTTCTTTGCCTTCTTAACCATTATGGTCCAAAAGATGAGAAAGAAGAAAAACTATTCAACTTTTAACATACCACCAGGACCTAGAGAGTTACCCATTATAGGAAATATTCACAATCTGTTAAGCTTTCAACCCCATTGGAAATTAAGAGAATTGGCCAAAAAATATGGACCCATAATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCACCCGAGTGGGCTATGGAGGTGATGAAAACCCATGATATTAACTTTGCATCAAGGCCTCGACTCCTTGCTACAGATATAGTAGCTTACAATTCCACAAATATAGCTTTTGCTCCATATGGTTATTACTGGAGACAGCTAGGAAAAATCTGCACATTGGAGCTTTTAAGCCTAAAAAGGAATGGATCGCCAATCAATCTCACTGAAGCTTTGATTTCTTCAATATACATTATTGTTTCGAGGTCCGCCTTTGGAAGTAAATGCAAAGACCAAGAAAAATTCATATCAGCGCTAAAAGAATCGATAAAGGTTGTAGGAGGTTTTGACTTGGGAGATTTGTTTCCTTCTGCTAAATGGCTACATGTTACTGGGTTGAGGCCTAAGCTTGAGAGGTTTCATCGCCAAACAGATCAGATATTAGAAAATATCACCAATGAACATAAAGAGGCAAAGAACACAAAAGCCAAAGATGATCAAGGTGAAGTAGAAGATGATCTGGTAGACGTTCTCTTAAAACATGAGGATGGTAGGAACAAGGATTTTTCCTTAACAAGGATTTCTATATAA 819 0.3736 MALLILYFAYLFFFAFLTIMVQKMRKKKNYSTFNIPPGPRELPIIGNIHNLLSFQPHWKLRELAKKYGPIMHLQLGEVSTIVISSPEWAMEVMKTHDINFASRPRLLATDIVAYNSTNIAFAPYGYYWRQLGKICTLELLSLKRNGSPINLTEALISSIYIIVSRSAFGSKCKDQEKFISALKESIKVVGGFDLGDLFPSAKWLHVTGLRPKLERFHRQTDQILENITNEHKEAKNTKAKDDQGEVEDDLVDVLLKHEDGRNKDFSLTRISI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01063 272 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 272 - -
Vifa3g01063 272 Gene3D Cytochrome P450 25 271 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01063 272 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01063 272 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01063 272 SUPERFAMILY Cytochrome P450 36 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa3g01063 272 Coils Coil 217 237 - -
Vifa3g01063 272 Pfam Cytochrome P450 36 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01063 Vifa-Chr3 267452908 267453792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g01063 1 268 Cytochrome P450 AT1G13110 32.000 2.55e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01063 - - tpra:123912942 376.711